Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_F03
         (636 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          26   0.27 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   1.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   1.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   7.6  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   7.6  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 18  VLAQIQYLRDRLRGVSGNGKRSTVRIKRPMTL*SIARIKLDSPKKRLS 161
           +L  I Y++D   G  G  K   V ++      ++  +KL+ PKKR++
Sbjct: 183 ILESISYVKDD--GTEGIAKSGDVLVETEPIYYNLTMVKLNWPKKRVT 228


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 60  VSGNGKRSTVRIKRPMTL*SIARIKLDSPKKRLSW 164
           +SGNGK+       P  L  + + +  +P+K  +W
Sbjct: 38  ISGNGKQYEAYEGIPYALPPVGKFRFKAPQKIPAW 72


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 60  VSGNGKRSTVRIKRPMTL*SIARIKLDSPKKRLSW 164
           +SGNGK+       P  L  + + +  +P+K  +W
Sbjct: 38  ISGNGKQYEAYEGIPYALPPVGKFRFKAPQKIPAW 72


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 618 FRYLCQGRRSG 586
           FRY C+GR +G
Sbjct: 60  FRYECEGRSAG 70


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 618 FRYLCQGRRSG 586
           FRY C+GR +G
Sbjct: 60  FRYECEGRSAG 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,184
Number of Sequences: 438
Number of extensions: 4133
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)