Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_E24
         (629 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   1.9  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    23   1.9  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   2.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   7.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   7.5  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.5  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +1

Query: 298 LRRGLGYHHVH-MMTAAMIVV 357
           LRR LGYH  H  + +A+IVV
Sbjct: 209 LRRRLGYHLFHTYIPSALIVV 229


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 475 LRDHLDRSRVDRETLYVCETSNELRLRLRGAI 380
           L+ H        +TLYVCE  N  R R + ++
Sbjct: 21  LKRHFQDKHEQSDTLYVCEFCNR-RYRTKNSL 51


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
 Frame = -3

Query: 285 HNLVHH*TSLRERGVHILYVHLNLGWRPQRHEDLQILQKRNRVDFWPPIH-----FSKDH 121
           H+ +HH   L ++  +++Y + +   R Q H + +IL++  + D+   +H     F  DH
Sbjct: 73  HHHLHHHQVLYQQSPYLMYENPDEEKRYQEHPNGKILREL-QTDYDRRLHDNSPSFLSDH 131

Query: 120 SK 115
           S+
Sbjct: 132 SR 133


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = -3

Query: 90  CWRCFPNRQHRFCSRHSAT*CLN 22
           CW CF   Q++       T C++
Sbjct: 606 CWHCFNCTQYQIRDHKDVTQCIS 628


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 463 LDRSRVDRETLYVCETSN 410
           L   + DRE  Y+C+ SN
Sbjct: 773 LQHVKEDREGFYLCQASN 790


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 463 LDRSRVDRETLYVCETSN 410
           L   + DRE  Y+C+ SN
Sbjct: 769 LQHVKEDREGFYLCQASN 786


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 141  IHFSKDHSKKMHLQVL 94
            + FSK+  K+ HLQ++
Sbjct: 1030 VDFSKEDGKEHHLQIM 1045


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +2

Query: 209 HPRFRWTYNMWTPRSRRDV*WWT 277
           HP     +N W P  R  +  WT
Sbjct: 466 HPYDHLVWNSWMPSIRGAIQQWT 488


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 310 LGYHHVHMMTAAMIVVTEGHLCTR 381
           L  HHVH      I+   G LC R
Sbjct: 276 LDNHHVHHANHHAILGHSGFLCER 299


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 30  IMSRYGDCKIYVGDLGNNASKPELEDAF 113
           I +RY D    V    N A+ PEL + F
Sbjct: 332 IRTRYKDSSSSVEGWENRATIPELNEEF 359


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,707
Number of Sequences: 438
Number of extensions: 3429
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)