Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_E22
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   1.8  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    21   7.2  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    21   7.2  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   9.6  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 425 GNQIYCAYFFSSFNVDEPSNYYL 493
           GN I C   + + ++  P+NYYL
Sbjct: 50  GNIITCIVIWRNPSMQTPTNYYL 72


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = +1

Query: 109 QWYYILIHIIWMNYIRI 159
           +W   ++HI+W +Y ++
Sbjct: 95  KWNNQILHILWTSYKKV 111


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = +1

Query: 109 QWYYILIHIIWMNYIRI 159
           +W   ++HI+W +Y ++
Sbjct: 78  KWNNQILHILWTSYKKV 94


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +2

Query: 431 QIYCAYFFSSFNVDEPSNYY 490
           Q+YC     +FN+ + +N +
Sbjct: 60  QLYCECILKNFNILDKNNVF 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,116
Number of Sequences: 438
Number of extensions: 3290
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)