Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_E21
         (329 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein ...    31   0.20 
AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or cys...    31   0.20 
Z74033-4|CAA98471.2|  822|Caenorhabditis elegans Hypothetical pr...    29   0.79 
AB095019-1|BAC22611.1|  822|Caenorhabditis elegans ubiquitin-spe...    29   0.79 
Z82092-3|CAB05013.1|  638|Caenorhabditis elegans Hypothetical pr...    27   3.2  
AL021471-3|CAA16297.1|  638|Caenorhabditis elegans Hypothetical ...    27   3.2  
U39994-1|AAB37019.1|  326|Caenorhabditis elegans Hypothetical pr...    26   5.5  

>U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform b protein.
          Length = 366

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 1   VNEVGSIAYAATQVGIVNKFGEDSDVLYEVV-ADRPFMFFIQGTKSP 138
           V+E G+ A AAT V  V K    S +   V  AD PF+F +  T  P
Sbjct: 313 VDEEGTTAAAATVVSFVRKSARPSAIKPIVFQADHPFLFMLTQTNHP 359


>AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 1   VNEVGSIAYAATQVGIVNKFGEDSDVLYEVV-ADRPFMFFIQGTKSP 138
           V+E G+ A AAT V  V K    S +   V  AD PF+F +  T  P
Sbjct: 313 VDEEGTTAAAATVVSFVRKSARPSAIKPIVFQADHPFLFMLTQTNHP 359


>Z74033-4|CAA98471.2|  822|Caenorhabditis elegans Hypothetical
           protein F38B7.5 protein.
          Length = 822

 Score = 29.1 bits (62), Expect = 0.79
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +2

Query: 56  SLEKIPTSSTRWWPIDRSCSSSKGR---SHQAIAVHRACL 166
           S++K+ +S  +W PI++ CSS K +   S + I+    CL
Sbjct: 399 SVQKLVSSFVKWSPIEKECSSCKHKISSSCERISTFPECL 438


>AB095019-1|BAC22611.1|  822|Caenorhabditis elegans
           ubiquitin-specific protease protein.
          Length = 822

 Score = 29.1 bits (62), Expect = 0.79
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +2

Query: 56  SLEKIPTSSTRWWPIDRSCSSSKGR---SHQAIAVHRACL 166
           S++K+ +S  +W PI++ CSS K +   S + I+    CL
Sbjct: 399 SVQKLVSSFVKWSPIEKECSSCKHKISSSCERISTFPECL 438


>Z82092-3|CAB05013.1|  638|Caenorhabditis elegans Hypothetical
           protein ZK384.3 protein.
          Length = 638

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 74  TSSTRWWPIDRSCSSSKGRSHQAIAVHR 157
           T+S  WW I   C+S+    +  I  H+
Sbjct: 473 TTSANWWVIGSKCTSANCNGYSGIRKHK 500


>AL021471-3|CAA16297.1|  638|Caenorhabditis elegans Hypothetical
           protein ZK384.3 protein.
          Length = 638

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 74  TSSTRWWPIDRSCSSSKGRSHQAIAVHR 157
           T+S  WW I   C+S+    +  I  H+
Sbjct: 473 TTSANWWVIGSKCTSANCNGYSGIRKHK 500


>U39994-1|AAB37019.1|  326|Caenorhabditis elegans Hypothetical
           protein C48C5.3 protein.
          Length = 326

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 218 YICFFLEFTSCPDDC 174
           +IC++LE  +C DDC
Sbjct: 161 FICWYLECFTCEDDC 175


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,764,728
Number of Sequences: 27780
Number of extensions: 127688
Number of successful extensions: 373
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)