Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_E19
         (248 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016661-1|AAB66049.2|  514|Caenorhabditis elegans Hypothetical ...    26   3.1  
AF099002-3|AAO91691.1|  570|Caenorhabditis elegans Hypothetical ...    26   4.1  
AF099002-2|AAC68740.2|  556|Caenorhabditis elegans Hypothetical ...    26   4.1  
AF099002-1|AAK68587.1|  559|Caenorhabditis elegans Hypothetical ...    26   4.1  
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    26   4.1  
Z82058-1|CAB04862.2|  352|Caenorhabditis elegans Hypothetical pr...    25   9.4  
U41552-8|AAC69099.2|  771|Caenorhabditis elegans Hypothetical pr...    25   9.4  

>AF016661-1|AAB66049.2|  514|Caenorhabditis elegans Hypothetical
           protein F02E11.2 protein.
          Length = 514

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -3

Query: 219 LFHPFLSNK*IRVVFYLPFVSYIHA 145
           +FHP +S K ++   Y+P++  IH+
Sbjct: 356 IFHPEISKKKLQKKVYIPYLFIIHS 380


>AF099002-3|AAO91691.1|  570|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1c protein.
          Length = 570

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 2   AAGIRHEASLYLYLCYKICHINYFYYY 82
           A+ +   A +Y   CY + H   FYY+
Sbjct: 434 ASQVERYADVYASSCYNLVHYPSFYYF 460


>AF099002-2|AAC68740.2|  556|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1a protein.
          Length = 556

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 2   AAGIRHEASLYLYLCYKICHINYFYYY 82
           A+ +   A +Y   CY + H   FYY+
Sbjct: 420 ASQVERYADVYASSCYNLVHYPSFYYF 446


>AF099002-1|AAK68587.1|  559|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1b protein.
          Length = 559

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 2   AAGIRHEASLYLYLCYKICHINYFYYY 82
           A+ +   A +Y   CY + H   FYY+
Sbjct: 423 ASQVERYADVYASSCYNLVHYPSFYYF 449


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 148  MNIRYKRQIENNANLFI*QERMEQISGRE 234
            + + Y RQ +NN +LF  Q+R  ++  RE
Sbjct: 2029 IRLGYTRQKKNNGDLFRVQDRSRKVVNRE 2057


>Z82058-1|CAB04862.2|  352|Caenorhabditis elegans Hypothetical
           protein T27C5.1 protein.
          Length = 352

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 227 PEICSIRSCQINKFALFSICLLYLIFMQVA 138
           P + +  SC I  F L ++C LY+ F   A
Sbjct: 65  PLLINHSSCVIFDFVLCTLCTLYVFFPMYA 94


>U41552-8|AAC69099.2|  771|Caenorhabditis elegans Hypothetical
           protein K07E3.2 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 6/37 (16%)
 Frame = +1

Query: 139 ATCMNIRYKRQ------IENNANLFI*QERMEQISGR 231
           ATCMN+R K +      IE + N+F+  ER  QI+ +
Sbjct: 235 ATCMNLRMKNKSKTQFAIEYSQNMFL--ERTSQIANK 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,771,385
Number of Sequences: 27780
Number of extensions: 96679
Number of successful extensions: 225
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 12,740,198
effective HSP length: 62
effective length of database: 11,017,838
effective search space used: 220356760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)