Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_E19
         (248 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   4.0  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              19   9.3  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    19   9.3  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 248 PFGDGSRPEICSI 210
           P G+G+R +IC +
Sbjct: 670 PNGEGTRADICQL 682


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 101 SLSISXXXXXXXXYDKFCSTDTGTDWPRA 15
           +L+I             C T+TG D  +A
Sbjct: 16  ALTIEELKTRLHTEQSVCKTETGIDQQKA 44


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 32  YLYLCYKICHI 64
           Y  LCY I HI
Sbjct: 99  YKQLCYNINHI 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,620
Number of Sequences: 438
Number of extensions: 1263
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4401495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)