Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_E15
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   1.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   1.9  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   4.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.9  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   7.8  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   7.8  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +2

Query: 65  AALHVHDMALLNADYLVNLTYTPDLYMCRTENDLLLKFSNSTPKIYCKNKWLSMSEGRKL 244
           AAL   +M  LN     + T +PD       NDL+       P ++ K +  S  EG KL
Sbjct: 619 AALGDSNMGFLNNSMCTSTTTSPDKEHVLAHNDLMSPLDE--PAVHIKQEGQS-PEGGKL 675


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +2

Query: 446 NIMYVEVRSVLPQLYELDGTVYDPLITAKAYQKTAKRFVKDHPD 577
           N+M ++++  +P+LY+L G V      A  + +     +K   D
Sbjct: 219 NVMRMKLKQFMPRLYDLLGYVMPDRTFAPFFTRVVTDTIKYRND 262


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +2

Query: 56  PKGAALHVHDMALLNADYLVNLTYTPDLYMCRTENDLLLKFSNSTPKIYCKN 211
           PKGAA     + +LN    ++  YTP L  C T + +  KF++   K   +N
Sbjct: 334 PKGAADFTAQVIVLNHPGQISNGYTPVL-DCHTAH-IACKFADIKEKCDRRN 383


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 421 CLEEI*RGQYNV 456
           C EEI RGQY +
Sbjct: 596 CAEEIGRGQYGI 607


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 421 CLEEI*RGQYNV 456
           C EEI RGQY +
Sbjct: 634 CAEEIGRGQYGI 645


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 378 WYTVLKYLKKAIQDSLILGYATS 310
           W T+L  +  A   +L LG+AT+
Sbjct: 354 WLTMLSMISGATCYALFLGHATN 376


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 378 WYTVLKYLKKAIQDSLILGYATS 310
           W T+L  +  A   +L LG+AT+
Sbjct: 322 WLTMLSMISGATCYALFLGHATN 344


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,203
Number of Sequences: 438
Number of extensions: 4032
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)