Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_E13
(538 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubul... 30 2.3
M22335-1|AAA28993.1| 454|Drosophila melanogaster protein ( D.me... 30 2.3
M20420-1|AAA28991.1| 446|Drosophila melanogaster protein ( D.me... 30 2.3
M20419-1|AAA28989.1| 447|Drosophila melanogaster protein ( D.me... 30 2.3
BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p pro... 30 2.3
BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p pro... 30 2.3
AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p pro... 30 2.3
AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA ... 30 2.3
AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA... 30 2.3
AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD... 30 2.3
AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC... 30 2.3
AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA... 30 2.3
AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB... 30 2.3
AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p pro... 29 3.0
AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA... 29 3.0
>X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubulin
protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
LVSEYQQYQEATA
Sbjct: 405 LVSEYQQYQEATA 417
>M22335-1|AAA28993.1| 454|Drosophila melanogaster protein (
D.melanogaster beta-3 tubulin gene, exons 2, 3 and 4. ).
Length = 454
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
LVSEYQQYQEATA
Sbjct: 424 LVSEYQQYQEATA 436
>M20420-1|AAA28991.1| 446|Drosophila melanogaster protein (
D.melanogaster beta-2 tubulin mRNA, complete cds. ).
Length = 446
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
LVSEYQQYQEATA
Sbjct: 418 LVSEYQQYQEATA 430
>M20419-1|AAA28989.1| 447|Drosophila melanogaster protein (
D.melanogaster beta-1 tubulin mRNA, complete cds. ).
Length = 447
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
LVSEYQQYQEATA
Sbjct: 418 LVSEYQQYQEATA 430
>BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p
protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
LVSEYQQYQEATA
Sbjct: 424 LVSEYQQYQEATA 436
>BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p
protein.
Length = 447
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
LVSEYQQYQEATA
Sbjct: 418 LVSEYQQYQEATA 430
>AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p
protein.
Length = 446
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
LVSEYQQYQEATA
Sbjct: 418 LVSEYQQYQEATA 430
>AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA
protein.
Length = 446
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
LVSEYQQYQEATA
Sbjct: 418 LVSEYQQYQEATA 430
>AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA
protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
LVSEYQQYQEATA
Sbjct: 424 LVSEYQQYQEATA 436
>AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD,
isoform D protein.
Length = 375
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
LVSEYQQYQEATA
Sbjct: 346 LVSEYQQYQEATA 358
>AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC,
isoform C protein.
Length = 375
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
LVSEYQQYQEATA
Sbjct: 346 LVSEYQQYQEATA 358
>AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA,
isoform A protein.
Length = 456
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
LVSEYQQYQEATA
Sbjct: 427 LVSEYQQYQEATA 439
>AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB,
isoform B protein.
Length = 447
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
LVSEYQQYQEATA
Sbjct: 418 LVSEYQQYQEATA 430
>AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p
protein.
Length = 457
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
L+SEYQQYQEATA
Sbjct: 418 LISEYQQYQEATA 430
>AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA
protein.
Length = 522
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -3
Query: 536 LVSEYQQYQEATA 498
L+SEYQQYQEATA
Sbjct: 483 LISEYQQYQEATA 495
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,653,442
Number of Sequences: 53049
Number of extensions: 332341
Number of successful extensions: 627
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -