Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_E13
         (538 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77131-2|CAB00853.4|  444|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z46240-1|CAA86310.1|  444|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z92803-10|CAB07246.1|  449|Caenorhabditis elegans Hypothetical p...    29   1.6  
Z35597-5|CAA84648.1|  450|Caenorhabditis elegans Hypothetical pr...    29   1.6  
X15242-1|CAA33320.1|  441|Caenorhabditis elegans beta-tubulin pr...    28   4.9  
U70844-1|AAB09092.1|  441|Caenorhabditis elegans Mechanosensory ...    28   4.9  
Z81129-2|CAB03407.1|  315|Caenorhabditis elegans Hypothetical pr...    27   6.5  
AF125952-8|AAD14692.1|  349|Caenorhabditis elegans Seven tm rece...    27   6.5  
AC006722-14|AAK68413.1|  349|Caenorhabditis elegans Seven tm rec...    27   6.5  

>Z77131-2|CAB00853.4|  444|Caenorhabditis elegans Hypothetical
           protein C54C6.2 protein.
          Length = 444

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 536 LVSEYQQYQEATA 498
           LVSEYQQYQEATA
Sbjct: 418 LVSEYQQYQEATA 430


>Z46240-1|CAA86310.1|  444|Caenorhabditis elegans Hypothetical
           protein B0272.1 protein.
          Length = 444

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 536 LVSEYQQYQEATA 498
           LVSEYQQYQEATA
Sbjct: 418 LVSEYQQYQEATA 430


>Z92803-10|CAB07246.1|  449|Caenorhabditis elegans Hypothetical
           protein K01G5.7 protein.
          Length = 449

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -3

Query: 536 LVSEYQQYQEATA 498
           L+SEYQQYQEATA
Sbjct: 418 LISEYQQYQEATA 430


>Z35597-5|CAA84648.1|  450|Caenorhabditis elegans Hypothetical
           protein C36E8.5 protein.
          Length = 450

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -3

Query: 536 LVSEYQQYQEATA 498
           L+SEYQQYQEATA
Sbjct: 418 LISEYQQYQEATA 430


>X15242-1|CAA33320.1|  441|Caenorhabditis elegans beta-tubulin
           protein.
          Length = 441

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -3

Query: 536 LVSEYQQYQEATA 498
           LVSEYQQYQEA A
Sbjct: 418 LVSEYQQYQEAAA 430


>U70844-1|AAB09092.1|  441|Caenorhabditis elegans Mechanosensory
           abnormality protein7 protein.
          Length = 441

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -3

Query: 536 LVSEYQQYQEATA 498
           LVSEYQQYQEA A
Sbjct: 418 LVSEYQQYQEAAA 430


>Z81129-2|CAB03407.1|  315|Caenorhabditis elegans Hypothetical
           protein T23F1.4 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 154 LYKVFIQTFNNYIMYYEVPKVMSAFTINQILL 249
           L K F   FNN +MY+ V   +   +I+Q+L+
Sbjct: 60  LAKPFAHNFNNCVMYFSVNTWIQPQSISQLLI 91


>AF125952-8|AAD14692.1|  349|Caenorhabditis elegans Seven tm
           receptor protein 76 protein.
          Length = 349

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 154 LYKVFIQTFNNYIMYYEVPKVMSAFTINQILLIM 255
           L + F   FNNY+MY+     M +  I +IL+++
Sbjct: 61  LARPFAHNFNNYLMYFSFNFWMKSREIPEILIMV 94


>AC006722-14|AAK68413.1|  349|Caenorhabditis elegans Seven tm
           receptor protein 265 protein.
          Length = 349

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 154 LYKVFIQTFNNYIMYYEVPKVMSAFTINQILLIM 255
           L + F   FNNY+MY+     M +  I +IL+++
Sbjct: 61  LARPFAHNFNNYLMYFSFNFWMKSREIPEILIMV 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,336,734
Number of Sequences: 27780
Number of extensions: 181840
Number of successful extensions: 463
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)