Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_E09
         (422 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical pr...    25   0.45 
Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical pr...    25   0.46 
U88176-2|AAO91740.3|  550|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z69716-4|CAA93528.1|  480|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z81496-13|CAB04075.1|  365|Caenorhabditis elegans Hypothetical p...    26   9.7  
U41016-6|ABC71808.1|  474|Caenorhabditis elegans Sensory axon gu...    26   9.7  
AL031627-26|CAA20972.1|  365|Caenorhabditis elegans Hypothetical...    26   9.7  

>Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical
           protein Y69H2.3b protein.
          Length = 796

 Score = 25.0 bits (52), Expect(2) = 0.45
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = +3

Query: 210 CATLKCSCGMNPSRTVIGLRSA-CPMEMRC 296
           CAT++CS G      ++    A CP    C
Sbjct: 381 CATMRCSAGTTCQEALVKCAKAPCPSHAAC 410



 Score = 24.2 bits (50), Expect(2) = 0.45
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 192 NVYHTKCATLKCSCG 236
           N+  T C+T+KCS G
Sbjct: 335 NIQITPCSTMKCSAG 349


>Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical
           protein Y69H2.3c protein.
          Length = 731

 Score = 25.0 bits (52), Expect(2) = 0.46
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = +3

Query: 210 CATLKCSCGMNPSRTVIGLRSA-CPMEMRC 296
           CAT++CS G      ++    A CP    C
Sbjct: 316 CATMRCSAGTTCQEALVKCAKAPCPSHAAC 345



 Score = 24.2 bits (50), Expect(2) = 0.46
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 192 NVYHTKCATLKCSCG 236
           N+  T C+T+KCS G
Sbjct: 270 NIQITPCSTMKCSAG 284


>U88176-2|AAO91740.3|  550|Caenorhabditis elegans Hypothetical
           protein F18F11.4 protein.
          Length = 550

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +2

Query: 2   RRSLSEDDKYSYFTEDVDLNTYMYYLHMN--YPYWMTDEVYGLNKERQGEILMYANSQLL 175
           R  LSED  + + T ++  +  +YYLH+     + +   V   N      +LM  N+++L
Sbjct: 394 RNELSEDKTHQHTTIEIYDSLNLYYLHLRRFERHLLNPPVVKYNNRFNSSLLMKLNTKML 453

Query: 176 ARL--RME 193
            +   RME
Sbjct: 454 DQFTERME 461


>Z69716-4|CAA93528.1|  480|Caenorhabditis elegans Hypothetical
           protein C04B4.4 protein.
          Length = 480

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 188 MERLSHKMCDIKMFMWNEPVKNGYWPKIRLPNGDEMPVRQNNFVP 322
           ++  S+KM D+K F  N+P K+ +    +   G   PV+  N  P
Sbjct: 392 LKMTSNKMLDLKGFSMNDPPKSRFAIANQNSEGRASPVQPKNTNP 436


>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
           protein C25F9.2 protein.
          Length = 1469

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +2

Query: 236 NEPVKNGYWPKIRLPNGDEMPVRQNNFVPVTSENLKLK 349
           N   +N Y P +  PN ++M   ++N V ++SE+ KLK
Sbjct: 138 NSDSENNYKPIMEFPNDEDMKFFKDN-VLLSSEDPKLK 174


>Z81496-13|CAB04075.1|  365|Caenorhabditis elegans Hypothetical
           protein Y102A5C.1 protein.
          Length = 365

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 284 GDEMPVRQNNFVPVTSENLKLKMLLDDV 367
           GD+  +RQ  F  +++ +L++ M LD V
Sbjct: 332 GDDEGIRQTTFYEISTNSLEMTMFLDFV 359


>U41016-6|ABC71808.1|  474|Caenorhabditis elegans Sensory axon
           guidance protein 1,isoform b protein.
          Length = 474

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +2

Query: 260 WPKIRLPNGDEMPVRQNNFVPVT---SENLKLKMLLDDVEQMIREGILTGQIETS 415
           WP   L   +E P R+  FV  T    + L  KM   D+++  ++    GQ  TS
Sbjct: 419 WPTSTLIRPEEQPGRRGEFVDFTYKRFDGLTQKMRYSDLKKQAKKNKKGGQQGTS 473


>AL031627-26|CAA20972.1|  365|Caenorhabditis elegans Hypothetical
           protein Y102A5C.1 protein.
          Length = 365

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 284 GDEMPVRQNNFVPVTSENLKLKMLLDDV 367
           GD+  +RQ  F  +++ +L++ M LD V
Sbjct: 332 GDDEGIRQTTFYEISTNSLEMTMFLDFV 359


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,667,316
Number of Sequences: 27780
Number of extensions: 170831
Number of successful extensions: 477
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)