Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_E03
(517 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0234 - 27739272-27739525,27739810-27739889,27740894-27741048 131 3e-31
06_03_0811 + 24830496-24831194 130 9e-31
02_01_0691 - 5167260-5167937 120 9e-28
01_01_1148 - 9113728-9113835,9113952-9114035,9114831-9114992,911... 111 4e-25
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 46 2e-05
02_01_0390 - 2824585-2825307,2828206-2828460,2829006-2829107,282... 31 0.55
06_01_0861 + 6527279-6527582,6527619-6527719,6527817-6528042,652... 31 0.73
11_06_0690 + 26303733-26306540 29 1.7
10_08_0906 - 21472490-21472732,21472947-21473271,21473351-214735... 29 1.7
05_07_0328 + 29286109-29286120,29286982-29287146,29288427-292885... 29 1.7
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 29 2.2
06_01_0671 - 4899611-4899829,4900870-4901448 29 2.2
09_01_0128 + 1932721-1935181,1936099-1936256 29 2.9
02_05_0934 - 32851709-32853398,32854458-32854738 27 6.8
08_01_0131 + 1050028-1050459,1051599-1051701,1052338-1052393,105... 27 8.9
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 27 8.9
05_02_0038 + 5890103-5890522,5891442-5891515,5891605-5891680,589... 27 8.9
>01_06_0234 - 27739272-27739525,27739810-27739889,27740894-27741048
Length = 162
Score = 131 bits (317), Expect = 3e-31
Identities = 67/148 (45%), Positives = 95/148 (64%), Gaps = 4/148 (2%)
Frame = +1
Query: 61 MAPIKVGDMLPS--LDLFE-DSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYV 231
MAP+ VGD LP L F+ + +V+ + AGKKVVLF VPGAFTP CS H+PG++
Sbjct: 1 MAPVAVGDTLPDGQLGWFDGEDKLQQVSVHGLAAGKKVVLFGVPGAFTPTCSNQHVPGFI 60
Query: 232 QNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFIKALDLGTNLPP 411
A+++K++GV +I+ VSVNDP+VM AW + V+ LAD G + KAL L +L
Sbjct: 61 NQAEQLKAKGVDDILLVSVNDPFVMKAWAKSYPENKHVKFLADGLGTYTKALGLELDLSE 120
Query: 412 LG-GFRSKRFSMVINDSKVEELNVEPDG 492
G G RS+RF+++ ++ KV N+E G
Sbjct: 121 KGLGIRSRRFALLADNLKVTVANIEEGG 148
>06_03_0811 + 24830496-24831194
Length = 232
Score = 130 bits (313), Expect = 9e-31
Identities = 70/160 (43%), Positives = 101/160 (63%), Gaps = 7/160 (4%)
Frame = +1
Query: 34 RALHTSKIAMAPIKVGDMLPSLDL-FEDSPANKVNTC---EITAGKKVVLFAVPGAFTPG 201
RA+ S A A I VGD LP L + DSP ++ T ++TAGKKVVLFAVPGAFTP
Sbjct: 59 RAVSASAPAAATIAVGDKLPDATLSYFDSPDGELKTVTVRDLTAGKKVVLFAVPGAFTPT 118
Query: 202 CSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFIK 381
C++ H+PG+V A +++++GV + CVSVND +VM AW +V +L+D NG +
Sbjct: 119 CTQKHVPGFVAKAGELRAKGVDAVACVSVNDAFVMRAWKESLGVGDEVLLLSDGNGELAR 178
Query: 382 ALDLGTNL--PPLG-GFRSKRFSMVINDSKVEELNVEPDG 492
A+ + +L P G G RS+R++++ D V+ LN+E G
Sbjct: 179 AMGVELDLSDKPAGLGVRSRRYALLAEDGVVKVLNLEEGG 218
>02_01_0691 - 5167260-5167937
Length = 225
Score = 120 bits (288), Expect = 9e-28
Identities = 67/161 (41%), Positives = 97/161 (60%), Gaps = 8/161 (4%)
Frame = +1
Query: 34 RALHTSKIAMAPIKVGDMLPSLDLFEDSPAN----KVNTCEITAGKKVVLFAVPGAFTPG 201
R+ ++ +A I VGD LP L PA+ V E+TAG+K VLFAVPGAFTP
Sbjct: 51 RSAASASTVVATIAVGDKLPDATLSYFDPADGELKTVTVAELTAGRKAVLFAVPGAFTPT 110
Query: 202 CSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNT-KGKVRMLADPNGAFI 378
CS+ HLPG+++ A ++ ++GV I CVSVND +VM AW V +L+D N
Sbjct: 111 CSQKHLPGFIEKAGELHAKGVDAIACVSVNDAFVMRAWKESLGLGDADVLLLSDGNLELT 170
Query: 379 KALDLGTNL--PPLG-GFRSKRFSMVINDSKVEELNVEPDG 492
+AL + +L P+G G RS+R++++ +D V+ LN+E G
Sbjct: 171 RALGVEMDLSDKPMGLGVRSRRYALLADDGVVKVLNLEEGG 211
>01_01_1148 -
9113728-9113835,9113952-9114035,9114831-9114992,
9115120-9115224,9115584-9116216,9117412-9117496,
9118426-9118520,9119083-9119241,9119968-9119997,
9120100-9120306
Length = 555
Score = 111 bits (266), Expect = 4e-25
Identities = 51/115 (44%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Frame = +1
Query: 142 EITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGA 321
+I GKKVV+F +PGA+T CS+ H+P Y N DK+K++GV ++CVSVNDPY + W
Sbjct: 66 DIFHGKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDPYALNGWAE 125
Query: 322 QHNTKGKVRMLADPNGAFIKALDLGTNL-PPLGGFRSKRFSMVINDSKVEELNVE 483
+ K + D +G+F K+LDL +L L G RS R+S ++D K++ NVE
Sbjct: 126 KLQAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRWSAFVDDGKIKAFNVE 180
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Frame = +1
Query: 49 SKIAMAPIKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSK--THLP 222
S +AM + +GD +P+L+L DS K+ + V+LF+ PG FTP C+ +
Sbjct: 32 SFVAMPGLTIGDTVPNLEL--DSTHGKIRIHDFVGDTYVILFSHPGDFTPVCTTELAAMA 89
Query: 223 GYVQNADK--MKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFIKALDL 393
GY + DK +K G+S V + ++ + + ++ADP+ IK L++
Sbjct: 90 GYAKEFDKRGVKLLGIS-CDDVQSHKDWIKDIEAYKPGNRVTYPIMADPSREAIKQLNM 147
>02_01_0390 -
2824585-2825307,2828206-2828460,2829006-2829107,
2829386-2829598,2829688-2829897
Length = 500
Score = 31.1 bits (67), Expect = 0.55
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -2
Query: 390 VKSFDECAIWISKHSYLSLGVVLGTPSGHNIRIVHRHAYYFRNALTFHLISVLHV-SRQM 214
++ FD +++ + +G V+G P+G+++ HR AY A T++ ++ V SR M
Sbjct: 417 LQGFDSWYSAAAENPHDLVGAVVGGPNGNDVFTDHRGAYMQTEACTYNTAPMVGVFSRLM 476
Query: 213 SLRTPR 196
L R
Sbjct: 477 ELERRR 482
>06_01_0861 +
6527279-6527582,6527619-6527719,6527817-6528042,
6528132-6528475,6528624-6528989,6529080-6529347,
6529479-6529696
Length = 608
Score = 30.7 bits (66), Expect = 0.73
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 175 AVPGAFTPGCSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAW-GAQHNTKGKVRM 351
A+ G P C H+ + K +S+ V V + YV+A W G+ H++
Sbjct: 140 ALDGTHIPACVPMHMQDRFRGRKKFQSQNVLAAVDFDLRFLYVLAGWEGSAHDSYVLQDA 199
Query: 352 LADPNG 369
L+ NG
Sbjct: 200 LSRTNG 205
>11_06_0690 + 26303733-26306540
Length = 935
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = +1
Query: 64 APIKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNAD 243
+P + G + L SP V+ CE +A + AV GAFT + P +V A
Sbjct: 524 SPARRGAAVGKESLLPSSPVAVVSQCEDSAPETQSTLAVVGAFTRPVFWSPQPVFVPAAK 583
Query: 244 KMKSEGVSEIVCVSVNDPYVMAAWGAQHNT 333
E + P + A G+QH +
Sbjct: 584 DSPPESAA---ATEPPQPLLPATVGSQHES 610
>10_08_0906 -
21472490-21472732,21472947-21473271,21473351-21473598,
21473823-21474071
Length = 354
Score = 29.5 bits (63), Expect = 1.7
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +1
Query: 199 GCSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFI 378
G T+ P +Q+ M S++V +++ V G Q GK + PNGAFI
Sbjct: 208 GLRMTYYPPCLQSDKVMGISPHSDVVGLTLL-LQVNDVQGLQIKKDGKWLSVDAPNGAFI 266
Query: 379 KALDLGTNLPPL--GGFRSKRFSMVINDSK 462
+++G L L G FRS VIN +K
Sbjct: 267 --VNIGDTLEILSNGKFRSVEHRAVINPNK 294
>05_07_0328 +
29286109-29286120,29286982-29287146,29288427-29288589,
29288625-29288903,29289047-29289122,29289725-29289787,
29292116-29292164,29292413-29292504,29293017-29293068,
29293209-29293271,29293382-29293431,29293941-29294016,
29294444-29294656,29294763-29294869,29294966-29295074,
29295489-29295689,29295773-29296033,29296154-29296171,
29296287-29296397,29296755-29297030,29297108-29297382,
29297814-29298165,29298371-29298655,29298715-29299261,
29301658-29301781,29301871-29301946,29302062-29302136,
29302300-29302353,29302833-29302892,29302977-29303093,
29303228-29303361,29303480-29303682,29303879-29303976,
29304358-29304461,29304537-29304702,29304803-29304925,
29305047-29305129,29305217-29305358,29305523-29305549,
29305784-29305854,29305930-29306518
Length = 2046
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 340 KVRMLADPNGAFIKALDLGTNLPPLGGF 423
K+ + ADPNG++++ L+ NL P+ F
Sbjct: 526 KLNLQADPNGSYVEVLERYVNLGPIVDF 553
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 409 PLGGFRSKRFSMVINDSKVEELNVEPDGTGLSC 507
PL G S F+ +IN S ++ +V+ DGT SC
Sbjct: 456 PLEGVGSAYFNELINRSMIQPADVQYDGTVQSC 488
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +1
Query: 70 IKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKM 249
+ G P+ L D V+ + G+ VV++ P TPGC+K + + +K
Sbjct: 118 VSKGSAAPNFTL-RDQDGRAVSLSKFK-GRPVVVYFYPADETPGCTK-QACAFRDSYEKF 174
Query: 250 KSEGVSEIVCVSVND 294
K G +E++ +S +D
Sbjct: 175 KKAG-AEVIGISGDD 188
>09_01_0128 + 1932721-1935181,1936099-1936256
Length = 872
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 328 CAGHPKRP*HTDRSQTRILFQKRPHFSSYQRFA 230
C+G KR H D+ QT L + H ++R+A
Sbjct: 337 CSGVDKRQKHIDQIQTNSLGMQEKHTDKFERYA 369
>02_05_0934 - 32851709-32853398,32854458-32854738
Length = 656
Score = 27.5 bits (58), Expect = 6.8
Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Frame = +1
Query: 19 NGVYVRALHTSKIAMAPIKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLF--AVPGAF 192
NG L + K D +P LF++S A + KV +F V ++
Sbjct: 134 NGAPQYGLMAGNSSNTTTKPSDNVP---LFQNSMAGNSSNFATRPSDKVPVFQPTVQPSY 190
Query: 193 TPGCSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAWG--AQHNTKGKVRMLADPN 366
P P Y + MK+E + I+ +S +PY W A+ KG +R +
Sbjct: 191 RPA------PNYKNHGAIMKNEAPARIIPISALNPY-QGRWAIKARVTAKGDIRRYHNAK 243
Query: 367 G 369
G
Sbjct: 244 G 244
>08_01_0131 +
1050028-1050459,1051599-1051701,1052338-1052393,
1052517-1052693,1052820-1052933,1053057-1053386
Length = 403
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 19 NGVYVRALHTSKIAMAPIKVGDMLPSLDLFEDSP 120
N ++ + ++ P K+GD+LP L +D P
Sbjct: 286 NSIHANKIEGIQVLWTPQKIGDILPEERLLKDYP 319
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +1
Query: 304 MAAWGAQHNTKGKVRMLADPNGAFIKALDLGTNLPPLGGFRSKRFSMVIN 453
+ AW ++R+LAD G + L P GG R R +IN
Sbjct: 1801 LLAWTGNDVLNRRLRILADSKGYILDDTGLYLATPGSGGKRGGRSDAIIN 1850
>05_02_0038 +
5890103-5890522,5891442-5891515,5891605-5891680,
5891892-5891959,5892189-5892312,5892714-5892812,
5893576-5893677,5893759-5893895,5894068-5894149,
5894668-5894730,5895680-5895727,5895833-5895895,
5896055-5896108,5896190-5896294
Length = 504
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -3
Query: 485 GSTFNSSTLLSLITIEKRFERNPPNGGRFVPRSRALMNAPF--GSASIRTFPLVLCWAPQ 312
G F++ T + + ++ + +P + + L+ A F S+R +PL++C
Sbjct: 109 GGDFSAFTFRAAAPVHRKAKESPLSSDAIFKQYGLLIRAGFWFNDKSLRDWPLLMCCLSL 168
Query: 311 AAITYGSF 288
A G+F
Sbjct: 169 PAFPLGAF 176
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.134 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,369,126
Number of Sequences: 37544
Number of extensions: 331248
Number of successful extensions: 877
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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