Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_E02
         (452 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC56F2.10c |alg5||dolichyl-phosphate beta-glucosyltransferase ...    26   3.1  
SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces...    25   5.4  
SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9 |Sch...    25   7.2  
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual     25   7.2  
SPAC823.07 |||GPI-phospholipase A2 activity regulator |Schizosac...    24   9.5  
SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces...    24   9.5  
SPCC553.09c |spb70|pol12|DNA polymerase alpha B-subunit|Schizosa...    24   9.5  
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca...    24   9.5  

>SPBC56F2.10c |alg5||dolichyl-phosphate beta-glucosyltransferase
           Alg5 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 322

 Score = 25.8 bits (54), Expect = 3.1
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 396 VDLTIVVPAYNEEK 437
           + +T++VPAYNE K
Sbjct: 62  IQITVIVPAYNESK 75


>SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 306

 Score = 25.0 bits (52), Expect = 5.4
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 257 TERSPINIIAANIPYMII 204
           T +SP+NII+ N+P +I+
Sbjct: 42  TGQSPLNIISYNVPPLIV 59


>SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 577

 Score = 24.6 bits (51), Expect = 7.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 231 YNIYWTPFCYFVYNYG 278
           YN YW P  Y +Y YG
Sbjct: 41  YN-YWEPLHYLLYGYG 55


>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 815

 Score = 24.6 bits (51), Expect = 7.2
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 207 YHVWYIRRYNIYWTPFCYFVYNYGTXY 287
           Y +W+ RR  + +T   YFV++  + Y
Sbjct: 452 YGIWHDRRSALKFTDIDYFVFSDASKY 478


>SPAC823.07 |||GPI-phospholipase A2 activity regulator
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 331

 Score = 24.2 bits (50), Expect = 9.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 180 GCFNDNMGYYHVWYIRRYNIYWT 248
           G   + + YY+ W  R   +YWT
Sbjct: 238 GLVQNILWYYYSWSNRNSGLYWT 260


>SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 383

 Score = 24.2 bits (50), Expect = 9.5
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
 Frame = -1

Query: 272 IIYKITERSPINIIAANIPYMIIAHIIIKTSIL--SYTTEQILHIKTLRV---IQLSYFK 108
           I+  I  +  +NII  N P ++++  +  TS++   Y     +H +TLR+   IQL  F 
Sbjct: 101 ILVTILNKQALNII--NAPLLMLSFQMAFTSLMVKMYWRFSSVHFQTLRLASAIQLKKFI 158

Query: 107 VIIIL 93
            + IL
Sbjct: 159 FVKIL 163


>SPCC553.09c |spb70|pol12|DNA polymerase alpha
           B-subunit|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 574

 Score = 24.2 bits (50), Expect = 9.5
 Identities = 11/39 (28%), Positives = 25/39 (64%)
 Frame = -1

Query: 278 SVIIYKITERSPINIIAANIPYMIIAHIIIKTSILSYTT 162
           S+I Y    ++P++++    P++ I HI+I+T  ++ T+
Sbjct: 326 SMISY--VNKNPVDLVILCGPFLDINHILIRTGNITGTS 362


>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
           synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 2410

 Score = 24.2 bits (50), Expect = 9.5
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 291 EDKXFRNYIQNNRKESNKYYSGEYTIHDNSP 199
           ED+   N  QN    S   YSGE+  HD  P
Sbjct: 31  EDEEPWNLNQNKNASSVLEYSGEWADHDFFP 61


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,720,567
Number of Sequences: 5004
Number of extensions: 30206
Number of successful extensions: 65
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 168258430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)