Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_D24
(489 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07979-1|CAA30790.1| 798|Homo sapiens protein ( Human mRNA for ... 64 2e-10
U33882-1|AAA79835.1| 82|Homo sapiens beta 1 integrin isoform A... 64 2e-10
BX537407-1|CAD97649.1| 823|Homo sapiens hypothetical protein pr... 64 2e-10
BC020057-1|AAH20057.1| 798|Homo sapiens integrin, beta 1 (fibro... 64 2e-10
AL365203-2|CAI14426.1| 798|Homo sapiens integrin, beta 1 (fibro... 64 2e-10
M57494-1|AAA52600.1| 761|Homo sapiens platelet glycoprotein III... 61 2e-09
M35999-1|AAA35927.1| 788|Homo sapiens protein ( Human platelet ... 61 2e-09
M32686-1|AAA67537.1| 762|Homo sapiens glycoprotein IIIa protein. 61 2e-09
M20311-1|AAA60122.1| 788|Homo sapiens glycoprotein IIIa protein. 61 2e-09
J02703-1|AAA52589.1| 788|Homo sapiens ITGB3 protein. 61 2e-09
BC127667-1|AAI27668.1| 788|Homo sapiens integrin, beta 3 (plate... 61 2e-09
BC127666-1|AAI27667.1| 788|Homo sapiens integrin, beta 3 (plate... 61 2e-09
U33880-1|AAA79833.1| 85|Homo sapiens beta 1 integrin isoform D... 61 2e-09
U28252-1|AAA81366.1| 50|Homo sapiens beta-1D integrin, cytopla... 61 2e-09
M35198-1|AAA36122.2| 788|Homo sapiens integrin beta-subunit pro... 54 3e-07
BC121178-1|AAI21179.1| 788|Homo sapiens integrin, beta 6 protein. 54 3e-07
AC080166-2|AAY24053.1| 449|Homo sapiens unknown protein. 54 3e-07
M84237-1|AAA74402.1| 26|Homo sapiens integrin beta-1 subunit p... 45 1e-04
Y00057-1|CAA68266.1| 761|Homo sapiens protein ( Human mRNA for ... 45 2e-04
X64072-1|CAA45427.1| 769|Homo sapiens integrin beta-2 subunit p... 45 2e-04
M15395-1|AAA59490.1| 769|Homo sapiens LYAM1 protein. 45 2e-04
BC021077-1|AAH21077.1| 758|Homo sapiens ITGB2 protein protein. 45 2e-04
BC005861-1|AAH05861.1| 769|Homo sapiens ITGB2 protein protein. 45 2e-04
AL163300-3|CAB90553.1| 769|Homo sapiens cell surface adhesion g... 45 2e-04
AK222505-1|BAD96225.1| 769|Homo sapiens integrin beta chain, be... 45 2e-04
S80335-1|AAB21332.1| 798|Homo sapiens integrin beta 7 subunit p... 42 0.001
S49378-1|AAB23688.1| 798|Homo sapiens integrin beta 7 subunit p... 42 0.001
M68892-1|AAA59184.1| 798|Homo sapiens integrin beta-7 subunit p... 42 0.001
M62880-1|AAA59185.1| 798|Homo sapiens integrin beta-7 subunit p... 42 0.001
L23823-1|AAA36118.1| 798|Homo sapiens integrin beta 7 subunit p... 42 0.001
BC015916-1|AAH15916.1| 798|Homo sapiens ITGB7 protein protein. 42 0.001
U95204-1|AAB71380.1| 784|Homo sapiens platelet membrane glycopr... 38 0.019
X53002-1|CAA37188.1| 799|Homo sapiens protein ( Human mRNA for ... 36 0.075
U33882-2|AAA79834.1| 109|Homo sapiens beta 1 integrin isoform C... 36 0.075
U33879-1|AAA79832.1| 73|Homo sapiens beta 1 integrin isoform B... 36 0.075
M35011-1|AAA52707.1| 796|Homo sapiens ITGB5 protein. 36 0.075
M34189-1|AAA59182.1| 38|Homo sapiens ITGB1 protein. 36 0.075
J05633-1|AAA59183.1| 799|Homo sapiens ITGB5 protein. 36 0.075
BC006541-1|AAH06541.1| 799|Homo sapiens integrin, beta 5 protein. 36 0.075
M25108-1|AAA36121.1| 74|Homo sapiens protein ( Human integrin ... 32 0.93
>X07979-1|CAA30790.1| 798|Homo sapiens protein ( Human mRNA for
integrin beta 1 subunit. ).
Length = 798
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAG 321
REFA+FEKE+M AKWDTGENPIYK A +T NP Y G
Sbjct: 761 REFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEG 797
Score = 42.3 bits (95), Expect = 9e-04
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 DDEDCLFVYVYSFNEPHEWVIRAQKERDCPKKVPILGIL-GVRAMCVASCXYLGPMRVWK 181
D +DC F + YS N +E ++ + +CP I+ I+ GV A V L + +WK
Sbjct: 695 DVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIV--LIGLALLLIWK 752
Query: 182 MATTIHD-RGVGSLRVLKKNA*WPSG 256
+ IHD R K NA W +G
Sbjct: 753 LLMIIHDRREFAKFEKEKMNAKWDTG 778
>U33882-1|AAA79835.1| 82|Homo sapiens beta 1 integrin isoform A
protein.
Length = 82
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAG 321
REFA+FEKE+M AKWDTGENPIYK A +T NP Y G
Sbjct: 45 REFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEG 81
>BX537407-1|CAD97649.1| 823|Homo sapiens hypothetical protein
protein.
Length = 823
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAG 321
REFA+FEKE+M AKWDTGENPIYK A +T NP Y G
Sbjct: 786 REFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEG 822
Score = 42.3 bits (95), Expect = 9e-04
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 DDEDCLFVYVYSFNEPHEWVIRAQKERDCPKKVPILGIL-GVRAMCVASCXYLGPMRVWK 181
D +DC F + YS N +E ++ + +CP I+ I+ GV A V L + +WK
Sbjct: 720 DVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIV--LIGLALLLIWK 777
Query: 182 MATTIHD-RGVGSLRVLKKNA*WPSG 256
+ IHD R K NA W +G
Sbjct: 778 LLMIIHDRREFAKFEKEKMNAKWDTG 803
>BC020057-1|AAH20057.1| 798|Homo sapiens integrin, beta 1
(fibronectin receptor, beta polypeptide, antigen CD29
includes protein.
Length = 798
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAG 321
REFA+FEKE+M AKWDTGENPIYK A +T NP Y G
Sbjct: 761 REFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEG 797
Score = 42.3 bits (95), Expect = 9e-04
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 DDEDCLFVYVYSFNEPHEWVIRAQKERDCPKKVPILGIL-GVRAMCVASCXYLGPMRVWK 181
D +DC F + YS N +E ++ + +CP I+ I+ GV A V L + +WK
Sbjct: 695 DVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIV--LIGLALLLIWK 752
Query: 182 MATTIHD-RGVGSLRVLKKNA*WPSG 256
+ IHD R K NA W +G
Sbjct: 753 LLMIIHDRREFAKFEKEKMNAKWDTG 778
>AL365203-2|CAI14426.1| 798|Homo sapiens integrin, beta 1
(fibronectin receptor, beta polypeptide, antigen CD29
includes protein.
Length = 798
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAG 321
REFA+FEKE+M AKWDTGENPIYK A +T NP Y G
Sbjct: 761 REFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEG 797
Score = 42.3 bits (95), Expect = 9e-04
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 DDEDCLFVYVYSFNEPHEWVIRAQKERDCPKKVPILGIL-GVRAMCVASCXYLGPMRVWK 181
D +DC F + YS N +E ++ + +CP I+ I+ GV A V L + +WK
Sbjct: 695 DVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIV--LIGLALLLIWK 752
Query: 182 MATTIHD-RGVGSLRVLKKNA*WPSG 256
+ IHD R K NA W +G
Sbjct: 753 LLMIIHDRREFAKFEKEKMNAKWDTG 778
>M57494-1|AAA52600.1| 761|Homo sapiens platelet glycoprotein IIIa
protein.
Length = 761
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAG 321
+EFA+FE+ER AKWDT NP+YK+ATSTF N TY G
Sbjct: 724 KEFAKFEEERARAKWDTANNPLYKEATSTFTNITYRG 760
Score = 37.9 bits (84), Expect = 0.019
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 5 DDEDCLFVYVYSFNEPHEWVIRAQKERDCPKKVPILGILGVRAMCVASCXYLGPMRVWKM 184
+++DC+ + Y + + ++ +E +CPK IL +L + M L + +WK+
Sbjct: 658 NEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVL-LSVMGAILLIGLAALLIWKL 716
Query: 185 ATTIHDR 205
TIHDR
Sbjct: 717 LITIHDR 723
>M35999-1|AAA35927.1| 788|Homo sapiens protein ( Human platelet
glycoprotein IIIa (GPIIIa) mRNA, complete cds. ).
Length = 788
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAG 321
+EFA+FE+ER AKWDT NP+YK+ATSTF N TY G
Sbjct: 751 KEFAKFEEERARAKWDTANNPLYKEATSTFTNITYRG 787
Score = 37.9 bits (84), Expect = 0.019
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 5 DDEDCLFVYVYSFNEPHEWVIRAQKERDCPKKVPILGILGVRAMCVASCXYLGPMRVWKM 184
+++DC+ + Y + + ++ +E +CPK IL +L + M L + +WK+
Sbjct: 685 NEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVL-LSVMGAILLIGLAALLIWKL 743
Query: 185 ATTIHDR 205
TIHDR
Sbjct: 744 LITIHDR 750
>M32686-1|AAA67537.1| 762|Homo sapiens glycoprotein IIIa protein.
Length = 762
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAG 321
+EFA+FE+ER AKWDT NP+YK+ATSTF N TY G
Sbjct: 725 KEFAKFEEERARAKWDTANNPLYKEATSTFTNITYRG 761
Score = 33.1 bits (72), Expect = 0.53
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 5 DDEDCLFVYVYSFNEPHEWVIRAQKERDCPKKVPILGILGVRAMCVASCXYLGPMRVWKM 184
+++DC+ + Y + + ++ +E +CPK IL +L + M L P K+
Sbjct: 659 NEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVL-LSVMGAILLIGLAPCSSGKL 717
Query: 185 ATTIHDR 205
TIHDR
Sbjct: 718 LITIHDR 724
>M20311-1|AAA60122.1| 788|Homo sapiens glycoprotein IIIa protein.
Length = 788
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAG 321
+EFA+FE+ER AKWDT NP+YK+ATSTF N TY G
Sbjct: 751 KEFAKFEEERARAKWDTANNPLYKEATSTFTNITYRG 787
Score = 37.9 bits (84), Expect = 0.019
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 5 DDEDCLFVYVYSFNEPHEWVIRAQKERDCPKKVPILGILGVRAMCVASCXYLGPMRVWKM 184
+++DC+ + Y + + ++ +E +CPK IL +L + M L + +WK+
Sbjct: 685 NEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVL-LSVMGAILLIGLAALLIWKL 743
Query: 185 ATTIHDR 205
TIHDR
Sbjct: 744 LITIHDR 750
>J02703-1|AAA52589.1| 788|Homo sapiens ITGB3 protein.
Length = 788
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAG 321
+EFA+FE+ER AKWDT NP+YK+ATSTF N TY G
Sbjct: 751 KEFAKFEEERARAKWDTANNPLYKEATSTFTNITYRG 787
Score = 37.9 bits (84), Expect = 0.019
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 5 DDEDCLFVYVYSFNEPHEWVIRAQKERDCPKKVPILGILGVRAMCVASCXYLGPMRVWKM 184
+++DC+ + Y + + ++ +E +CPK IL +L + M L + +WK+
Sbjct: 685 NEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVL-LSVMGAILLIGLAALLIWKL 743
Query: 185 ATTIHDR 205
TIHDR
Sbjct: 744 LITIHDR 750
>BC127667-1|AAI27668.1| 788|Homo sapiens integrin, beta 3 (platelet
glycoprotein IIIa, antigen CD61) protein.
Length = 788
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAG 321
+EFA+FE+ER AKWDT NP+YK+ATSTF N TY G
Sbjct: 751 KEFAKFEEERARAKWDTANNPLYKEATSTFTNITYRG 787
Score = 37.9 bits (84), Expect = 0.019
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 5 DDEDCLFVYVYSFNEPHEWVIRAQKERDCPKKVPILGILGVRAMCVASCXYLGPMRVWKM 184
+++DC+ + Y + + ++ +E +CPK IL +L + M L + +WK+
Sbjct: 685 NEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVL-LSVMGAILLIGLAALLIWKL 743
Query: 185 ATTIHDR 205
TIHDR
Sbjct: 744 LITIHDR 750
>BC127666-1|AAI27667.1| 788|Homo sapiens integrin, beta 3 (platelet
glycoprotein IIIa, antigen CD61) protein.
Length = 788
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAG 321
+EFA+FE+ER AKWDT NP+YK+ATSTF N TY G
Sbjct: 751 KEFAKFEEERARAKWDTANNPLYKEATSTFTNITYRG 787
Score = 37.9 bits (84), Expect = 0.019
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 5 DDEDCLFVYVYSFNEPHEWVIRAQKERDCPKKVPILGILGVRAMCVASCXYLGPMRVWKM 184
+++DC+ + Y + + ++ +E +CPK IL +L + M L + +WK+
Sbjct: 685 NEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVL-LSVMGAILLIGLAALLIWKL 743
Query: 185 ATTIHDR 205
TIHDR
Sbjct: 744 LITIHDR 750
>U33880-1|AAA79833.1| 85|Homo sapiens beta 1 integrin isoform D
protein.
Length = 85
Score = 60.9 bits (141), Expect = 2e-09
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 315
REFA+FEKE+M AKWDT ENPIYK + FKNP Y
Sbjct: 45 REFAKFEKEKMNAKWDTQENPIYKSPINNFKNPNY 79
>U28252-1|AAA81366.1| 50|Homo sapiens beta-1D integrin,
cytoplasmic domain protein.
Length = 50
Score = 60.9 bits (141), Expect = 2e-09
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 315
REFA+FEKE+M AKWDT ENPIYK + FKNP Y
Sbjct: 10 REFAKFEKEKMNAKWDTQENPIYKSPINNFKNPNY 44
>M35198-1|AAA36122.2| 788|Homo sapiens integrin beta-subunit
protein.
Length = 788
Score = 54.0 bits (124), Expect = 3e-07
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 315
+E A+FE ER AKW TG NP+Y+ +TSTFKN TY
Sbjct: 740 KEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTY 774
Score = 40.7 bits (91), Expect = 0.003
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +2
Query: 8 DEDCLFVYVYSFNEPHEWVIRAQKERDCPK--KVPILGILGVRAMCVASCXYLGPMRVWK 181
+ +CL ++ + + + +I + E+DCPK +P++ +LGV + L + +WK
Sbjct: 675 ENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMI-MLGVSLAILLIGVVL--LCIWK 731
Query: 182 MATTIHDR-GVGSLRVLKKNA*WPSGTRARIR 274
+ + HDR V + A W +GT R
Sbjct: 732 LLVSFHDRKEVAKFEAERSKAKWQTGTNPLYR 763
>BC121178-1|AAI21179.1| 788|Homo sapiens integrin, beta 6 protein.
Length = 788
Score = 54.0 bits (124), Expect = 3e-07
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 315
+E A+FE ER AKW TG NP+Y+ +TSTFKN TY
Sbjct: 740 KEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTY 774
Score = 40.7 bits (91), Expect = 0.003
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +2
Query: 8 DEDCLFVYVYSFNEPHEWVIRAQKERDCPK--KVPILGILGVRAMCVASCXYLGPMRVWK 181
+ +CL ++ + + + +I + E+DCPK +P++ +LGV + L + +WK
Sbjct: 675 ENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMI-MLGVSLAILLIGVVL--LCIWK 731
Query: 182 MATTIHDR-GVGSLRVLKKNA*WPSGTRARIR 274
+ + HDR V + A W +GT R
Sbjct: 732 LLVSFHDRKEVAKFEAERSKAKWQTGTNPLYR 763
>AC080166-2|AAY24053.1| 449|Homo sapiens unknown protein.
Length = 449
Score = 54.0 bits (124), Expect = 3e-07
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 315
+E A+FE ER AKW TG NP+Y+ +TSTFKN TY
Sbjct: 401 KEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTY 435
Score = 40.7 bits (91), Expect = 0.003
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +2
Query: 8 DEDCLFVYVYSFNEPHEWVIRAQKERDCPK--KVPILGILGVRAMCVASCXYLGPMRVWK 181
+ +CL ++ + + + +I + E+DCPK +P++ +LGV + L + +WK
Sbjct: 336 ENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMI-MLGVSLAILLIGVVL--LCIWK 392
Query: 182 MATTIHDR-GVGSLRVLKKNA*WPSGTRARIR 274
+ + HDR V + A W +GT R
Sbjct: 393 LLVSFHDRKEVAKFEAERSKAKWQTGTNPLYR 424
>M84237-1|AAA74402.1| 26|Homo sapiens integrin beta-1 subunit
protein.
Length = 26
Score = 45.2 bits (102), Expect = 1e-04
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +1
Query: 247 AKWDTGENPIYKQATSTFKNPTYAG 321
AKWDTGENPIYK A +T NP Y G
Sbjct: 1 AKWDTGENPIYKSAVTTVVNPKYEG 25
>Y00057-1|CAA68266.1| 761|Homo sapiens protein ( Human mRNA for
beta-subunit of cell surface adhesion glycoproteins
LFA-1, CR3 and p150,95. ).
Length = 761
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/36 (47%), Positives = 28/36 (77%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 318
RE+ RFEKE++ ++W+ +NP++K AT+T NP +A
Sbjct: 725 REYRRFEKEKLKSQWNN-DNPLFKSATTTVMNPKFA 759
>X64072-1|CAA45427.1| 769|Homo sapiens integrin beta-2 subunit
protein.
Length = 769
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/36 (47%), Positives = 28/36 (77%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 318
RE+ RFEKE++ ++W+ +NP++K AT+T NP +A
Sbjct: 733 REYRRFEKEKLKSQWNN-DNPLFKSATTTVMNPKFA 767
>M15395-1|AAA59490.1| 769|Homo sapiens LYAM1 protein.
Length = 769
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/36 (47%), Positives = 28/36 (77%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 318
RE+ RFEKE++ ++W+ +NP++K AT+T NP +A
Sbjct: 733 REYRRFEKEKLKSQWNN-DNPLFKSATTTVMNPKFA 767
>BC021077-1|AAH21077.1| 758|Homo sapiens ITGB2 protein protein.
Length = 758
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/36 (47%), Positives = 28/36 (77%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 318
RE+ RFEKE++ ++W+ +NP++K AT+T NP +A
Sbjct: 722 REYRRFEKEKLKSQWNN-DNPLFKSATTTVMNPKFA 756
>BC005861-1|AAH05861.1| 769|Homo sapiens ITGB2 protein protein.
Length = 769
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/36 (47%), Positives = 28/36 (77%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 318
RE+ RFEKE++ ++W+ +NP++K AT+T NP +A
Sbjct: 733 REYRRFEKEKLKSQWNN-DNPLFKSATTTVMNPKFA 767
>AL163300-3|CAB90553.1| 769|Homo sapiens cell surface adhesion
glycoprotein (LFA-1/CR3/P150,959 beta subunit precursor)
protein.
Length = 769
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/36 (47%), Positives = 28/36 (77%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 318
RE+ RFEKE++ ++W+ +NP++K AT+T NP +A
Sbjct: 733 REYRRFEKEKLKSQWNN-DNPLFKSATTTVMNPKFA 767
>AK222505-1|BAD96225.1| 769|Homo sapiens integrin beta chain, beta
2 precursor variant protein.
Length = 769
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/36 (47%), Positives = 28/36 (77%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 318
RE+ RFEKE++ ++W+ +NP++K AT+T NP +A
Sbjct: 733 REYRRFEKEKLKSQWNN-DNPLFKSATTTVMNPKFA 767
>S80335-1|AAB21332.1| 798|Homo sapiens integrin beta 7 subunit
protein.
Length = 798
Score = 41.9 bits (94), Expect = 0.001
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 315
RE++RFEKE+ W NP+YK A +T NP +
Sbjct: 756 REYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRF 790
>S49378-1|AAB23688.1| 798|Homo sapiens integrin beta 7 subunit
protein.
Length = 798
Score = 41.9 bits (94), Expect = 0.001
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 315
RE++RFEKE+ W NP+YK A +T NP +
Sbjct: 756 REYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRF 790
>M68892-1|AAA59184.1| 798|Homo sapiens integrin beta-7 subunit
protein.
Length = 798
Score = 41.9 bits (94), Expect = 0.001
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 315
RE++RFEKE+ W NP+YK A +T NP +
Sbjct: 756 REYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRF 790
>M62880-1|AAA59185.1| 798|Homo sapiens integrin beta-7 subunit
protein.
Length = 798
Score = 41.9 bits (94), Expect = 0.001
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 315
RE++RFEKE+ W NP+YK A +T NP +
Sbjct: 756 REYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRF 790
>L23823-1|AAA36118.1| 798|Homo sapiens integrin beta 7 subunit
protein.
Length = 798
Score = 41.9 bits (94), Expect = 0.001
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 315
RE++RFEKE+ W NP+YK A +T NP +
Sbjct: 756 REYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRF 790
>BC015916-1|AAH15916.1| 798|Homo sapiens ITGB7 protein protein.
Length = 798
Score = 41.9 bits (94), Expect = 0.001
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 315
RE++RFEKE+ W NP+YK A +T NP +
Sbjct: 756 REYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRF 790
>U95204-1|AAB71380.1| 784|Homo sapiens platelet membrane
glycoprotein IIIa beta subunit protein.
Length = 784
Score = 37.9 bits (84), Expect = 0.019
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 5 DDEDCLFVYVYSFNEPHEWVIRAQKERDCPKKVPILGILGVRAMCVASCXYLGPMRVWKM 184
+++DC+ + Y + + ++ +E +CPK IL +L + M L + +WK+
Sbjct: 685 NEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVL-LSVMGAILLIGLAALLIWKL 743
Query: 185 ATTIHDR 205
TIHDR
Sbjct: 744 LITIHDR 750
Score = 32.3 bits (70), Expect = 0.93
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 211 REFARFEKERMMAKWDT 261
+EFA+FE+ER AKWDT
Sbjct: 751 KEFAKFEEERARAKWDT 767
>X53002-1|CAA37188.1| 799|Homo sapiens protein ( Human mRNA for
integrin beta-5 subunit. ).
Length = 799
Score = 35.9 bits (79), Expect = 0.075
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATST 297
REFA+F+ ER A+++ NP+Y++ ST
Sbjct: 752 REFAKFQSERSRARYEMASNPLYRKPIST 780
>U33882-2|AAA79834.1| 109|Homo sapiens beta 1 integrin isoform C
protein.
Length = 109
Score = 35.9 bits (79), Expect = 0.075
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 211 REFARFEKERMMAKWDT 261
REFA+FEKE+M AKWDT
Sbjct: 45 REFAKFEKEKMNAKWDT 61
>U33879-1|AAA79832.1| 73|Homo sapiens beta 1 integrin isoform B
protein.
Length = 73
Score = 35.9 bits (79), Expect = 0.075
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 211 REFARFEKERMMAKWDT 261
REFA+FEKE+M AKWDT
Sbjct: 45 REFAKFEKEKMNAKWDT 61
>M35011-1|AAA52707.1| 796|Homo sapiens ITGB5 protein.
Length = 796
Score = 35.9 bits (79), Expect = 0.075
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATST 297
REFA+F+ ER A+++ NP+Y++ ST
Sbjct: 752 REFAKFQSERSRARYEMASNPLYRKPIST 780
>M34189-1|AAA59182.1| 38|Homo sapiens ITGB1 protein.
Length = 38
Score = 35.9 bits (79), Expect = 0.075
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 211 REFARFEKERMMAKWDT 261
REFA+FEKE+M AKWDT
Sbjct: 10 REFAKFEKEKMNAKWDT 26
>J05633-1|AAA59183.1| 799|Homo sapiens ITGB5 protein.
Length = 799
Score = 35.9 bits (79), Expect = 0.075
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATST 297
REFA+F+ ER A+++ NP+Y++ ST
Sbjct: 752 REFAKFQSERSRARYEMASNPLYRKPIST 780
>BC006541-1|AAH06541.1| 799|Homo sapiens integrin, beta 5 protein.
Length = 799
Score = 35.9 bits (79), Expect = 0.075
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 211 REFARFEKERMMAKWDTGENPIYKQATST 297
REFA+F+ ER A+++ NP+Y++ ST
Sbjct: 752 REFAKFQSERSRARYEMASNPLYRKPIST 780
>M25108-1|AAA36121.1| 74|Homo sapiens protein ( Human integrin
beta-3 subunit mRNA, 3' end. ).
Length = 74
Score = 32.3 bits (70), Expect = 0.93
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 211 REFARFEKERMMAKWDT 261
+EFA+FE+ER AKWDT
Sbjct: 45 KEFAKFEEERARAKWDT 61
Score = 31.1 bits (67), Expect = 2.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 77 KERDCPKKVPILGILGVRAMCVASCXYLGPMRVWKMATTIHDR 205
+E +CPK IL +L + M L + +WK+ TIHDR
Sbjct: 3 EEPECPKGPDILVVL-LSVMGAILLIGLAALLIWKLLITIHDR 44
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,803,753
Number of Sequences: 237096
Number of extensions: 1476603
Number of successful extensions: 2338
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2320
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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