Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_D21
(471 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-322|AAF59277.1| 681|Drosophila melanogaster CG1850-PA ... 29 2.4
U80064-1|AAC24158.1| 972|Drosophila melanogaster DNA topoisomer... 29 3.2
M74557-1|AAA28951.1| 972|Drosophila melanogaster topoisomerase ... 29 3.2
BT024938-1|ABE01168.1| 382|Drosophila melanogaster IP16129p pro... 29 3.2
BT023755-1|AAZ41763.1| 974|Drosophila melanogaster RE58921p pro... 29 3.2
AE014298-2126|AAN09660.1| 581|Drosophila melanogaster CG6146-PB... 29 3.2
AE014298-2125|AAX52496.1| 974|Drosophila melanogaster CG6146-PC... 29 3.2
AE014298-2124|AAF48440.1| 974|Drosophila melanogaster CG6146-PA... 29 3.2
BT021204-1|AAX33352.1| 1072|Drosophila melanogaster UT01249p pro... 29 4.2
AL035632-3|CAB38464.1| 1072|Drosophila melanogaster EG:BACN32G11... 29 4.2
AE014298-208|AAF45626.1| 1072|Drosophila melanogaster CG14786-PA... 29 4.2
>AE013599-322|AAF59277.1| 681|Drosophila melanogaster CG1850-PA
protein.
Length = 681
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Frame = +3
Query: 192 QIRTNRPNNVRPDRFPIQN-----ISPSQNPFDTIMIISSVSPIRWVPIKDVADQATAAA 356
+I+TN+PN ++P P+ P NPF ++ ++ S R +P++ + T A
Sbjct: 574 RIQTNQPNAIQPSTVPVSTPALVLAEPGSNPF--LVRYTTKSAARPLPLQTLQPLPTPIA 631
Query: 357 N-----INYSTTTS 383
+ + YS+T+S
Sbjct: 632 SELKQQVTYSSTSS 645
>U80064-1|AAC24158.1| 972|Drosophila melanogaster DNA topoisomerase
I protein.
Length = 972
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 275 YNNDYIIGFPNQMGPNKRRCRSGNSSSKHQLLYYYFRTQRRDTRFASVEDAEIAGTQNQ 451
+NN++ F M P +R Q ++ YF+ + + AS E+ I +N+
Sbjct: 497 FNNNFFKDFRKSMTPREREIIKDFRKCNFQEMFNYFQAESEKRKAASKEEKLIKKNENE 555
>M74557-1|AAA28951.1| 972|Drosophila melanogaster topoisomerase I
protein.
Length = 972
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 275 YNNDYIIGFPNQMGPNKRRCRSGNSSSKHQLLYYYFRTQRRDTRFASVEDAEIAGTQNQ 451
+NN++ F M P +R Q ++ YF+ + + AS E+ I +N+
Sbjct: 497 FNNNFFKDFRKSMTPREREIIKDFRKCNFQEMFNYFQAESEKRKAASKEEKLIKKNENE 555
>BT024938-1|ABE01168.1| 382|Drosophila melanogaster IP16129p
protein.
Length = 382
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 275 YNNDYIIGFPNQMGPNKRRCRSGNSSSKHQLLYYYFRTQRRDTRFASVEDAEIAGTQNQ 451
+NN++ F M P +R Q ++ YF+ + + AS E+ I +N+
Sbjct: 12 FNNNFFKDFRKSMTPREREIIKDFRKCNFQEMFNYFQAESEKRKAASKEEKLIKKNENE 70
>BT023755-1|AAZ41763.1| 974|Drosophila melanogaster RE58921p
protein.
Length = 974
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 275 YNNDYIIGFPNQMGPNKRRCRSGNSSSKHQLLYYYFRTQRRDTRFASVEDAEIAGTQNQ 451
+NN++ F M P +R Q ++ YF+ + + AS E+ I +N+
Sbjct: 499 FNNNFFKDFRKSMTPREREIIKDFRKCNFQEMFNYFQAESEKRKAASKEEKLIKKNENE 557
>AE014298-2126|AAN09660.1| 581|Drosophila melanogaster CG6146-PB,
isoform B protein.
Length = 581
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 275 YNNDYIIGFPNQMGPNKRRCRSGNSSSKHQLLYYYFRTQRRDTRFASVEDAEIAGTQNQ 451
+NN++ F M P +R Q ++ YF+ + + AS E+ I +N+
Sbjct: 106 FNNNFFKDFRKSMTPREREIIKDFRKCNFQEMFNYFQAESEKRKAASKEEKLIKKNENE 164
>AE014298-2125|AAX52496.1| 974|Drosophila melanogaster CG6146-PC,
isoform C protein.
Length = 974
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 275 YNNDYIIGFPNQMGPNKRRCRSGNSSSKHQLLYYYFRTQRRDTRFASVEDAEIAGTQNQ 451
+NN++ F M P +R Q ++ YF+ + + AS E+ I +N+
Sbjct: 499 FNNNFFKDFRKSMTPREREIIKDFRKCNFQEMFNYFQAESEKRKAASKEEKLIKKNENE 557
>AE014298-2124|AAF48440.1| 974|Drosophila melanogaster CG6146-PA,
isoform A protein.
Length = 974
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 275 YNNDYIIGFPNQMGPNKRRCRSGNSSSKHQLLYYYFRTQRRDTRFASVEDAEIAGTQNQ 451
+NN++ F M P +R Q ++ YF+ + + AS E+ I +N+
Sbjct: 499 FNNNFFKDFRKSMTPREREIIKDFRKCNFQEMFNYFQAESEKRKAASKEEKLIKKNENE 557
>BT021204-1|AAX33352.1| 1072|Drosophila melanogaster UT01249p protein.
Length = 1072
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 129 LAIKPRIRIVHSLSILNCNNLKNECDQFVARQIRLVRLQRGI 4
L I P RI H L + NC +L E V +RL R RG+
Sbjct: 962 LIINPEFRINHELLVKNCEHLGQE--GAVRTLLRLARGVRGV 1001
>AL035632-3|CAB38464.1| 1072|Drosophila melanogaster EG:BACN32G11.3
protein.
Length = 1072
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 129 LAIKPRIRIVHSLSILNCNNLKNECDQFVARQIRLVRLQRGI 4
L I P RI H L + NC +L E V +RL R RG+
Sbjct: 962 LIINPEFRINHELLVKNCEHLGQE--GAVRTLLRLARGVRGV 1001
>AE014298-208|AAF45626.1| 1072|Drosophila melanogaster CG14786-PA
protein.
Length = 1072
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 129 LAIKPRIRIVHSLSILNCNNLKNECDQFVARQIRLVRLQRGI 4
L I P RI H L + NC +L E V +RL R RG+
Sbjct: 962 LIINPEFRINHELLVKNCEHLGQE--GAVRTLLRLARGVRGV 1001
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,532,851
Number of Sequences: 53049
Number of extensions: 425486
Number of successful extensions: 1047
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -