Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_D21
         (471 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   2.9  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   3.8  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   3.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   3.8  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    21   6.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   8.8  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   8.8  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   8.8  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   8.8  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   8.8  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   8.8  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   8.8  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   8.8  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   8.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 207  RPNNVRPDRFPIQNISPS 260
            RP   RP+R P  ++SPS
Sbjct: 1363 RPVPERPERVPTVDLSPS 1380


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 238 GNRSGRTLLGLLVRICPP 185
           GN  G+TL+  L  I PP
Sbjct: 221 GNADGKTLIEALDAILPP 238


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 368 LYYYFRTQRRDT 403
           +YYYF TQR  T
Sbjct: 474 VYYYFFTQRTST 485


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 368 LYYYFRTQRRDT 403
           +YYYF TQR  T
Sbjct: 474 VYYYFFTQRTST 485


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 215 QRPTRPVPDSEYFPESKSFRYNNDY 289
           +R   P   S   P S ++ YNN+Y
Sbjct: 74  ERSKEPKIISNNNPLSNNYNYNNNY 98


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 11/48 (22%), Positives = 18/48 (37%)
 Frame = -2

Query: 323 YWDPSDWGNR*YNHYCIERILTRGNILNREPVWSDVVRSVSAYLSSIL 180
           Y +  DW    Y  Y      + G    + P+WS+       Y+  I+
Sbjct: 281 YLEEFDWQKPFYPGYYPTMTYSNGLPFPQRPIWSNFPIYKYKYIREIM 328


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 384 GPSVVIHDSLQLRMLRLPVHRINP 455
           GP      + +LR +++ +HR+ P
Sbjct: 114 GPEGTQVSATELRKIKVDIHRVLP 137


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 384 GPSVVIHDSLQLRMLRLPVHRINP 455
           GP      + +LR +++ +HR+ P
Sbjct: 114 GPEGTQVSATELRKIKVDIHRVLP 137


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 384 GPSVVIHDSLQLRMLRLPVHRINP 455
           GP      + +LR +++ +HR+ P
Sbjct: 114 GPEGTQVSATELRKIKVDIHRVLP 137


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 384 GPSVVIHDSLQLRMLRLPVHRINP 455
           GP      + +LR +++ +HR+ P
Sbjct: 114 GPEGTQVSATELRKIKVDIHRVLP 137


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 384 GPSVVIHDSLQLRMLRLPVHRINP 455
           GP      + +LR +++ +HR+ P
Sbjct: 114 GPEGTQVSATELRKIKVDIHRVLP 137


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 384 GPSVVIHDSLQLRMLRLPVHRINP 455
           GP      + +LR +++ +HR+ P
Sbjct: 114 GPEGTQVSATELRKIKVDIHRVLP 137


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 384 GPSVVIHDSLQLRMLRLPVHRINP 455
           GP      + +LR +++ +HR+ P
Sbjct: 114 GPEGTQVSATELRKIKVDIHRVLP 137


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 384 GPSVVIHDSLQLRMLRLPVHRINP 455
           GP      + +LR +++ +HR+ P
Sbjct: 114 GPEGTQVSATELRKIKVDIHRVLP 137


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,224
Number of Sequences: 438
Number of extensions: 3050
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)