Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_D19
(482 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen... 30 3.7
Y00724-1|CAA68709.1| 765|Homo sapiens protein ( Human mRNA for ... 30 3.7
V00503-1|CAA23761.1| 740|Homo sapiens protein ( Human mRNA enco... 30 3.7
J03464-1|AAB59374.1| 1366|Homo sapiens COL1A2 protein. 30 3.7
AF004877-1|AAB93981.1| 1366|Homo sapiens pro-alpha 2(I) collagen... 30 3.7
Y10658-1|CAA71668.1| 1270|Homo sapiens nuclear DNA helicase II p... 29 8.6
U03643-1|AAA03571.1| 235|Homo sapiens leukophysin protein. 29 8.6
L13848-1|AAB48855.1| 1279|Homo sapiens RNA helicase A protein. 29 8.6
BC107881-1|AAI07882.1| 443|Homo sapiens DHX9 protein protein. 29 8.6
BC058896-1|AAH58896.1| 402|Homo sapiens DHX9 protein protein. 29 8.6
AL662837-2|CAI19277.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 29 8.6
AL355999-1|CAH71701.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 29 8.6
>Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen
protein.
Length = 1366
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 61 DGSRRPHGATYDDGPSWSNASNDGNETTYDGPINGSYGPNGADG 192
DG+R HGA GP + A+ D E GP G GP G+ G
Sbjct: 672 DGARGAHGAVGAPGP--AGATGDRGEAGAAGPA-GPAGPRGSPG 712
>Y00724-1|CAA68709.1| 765|Homo sapiens protein ( Human mRNA for
prepro-alpha2(I) collagen (COL1A2). ).
Length = 765
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 61 DGSRRPHGATYDDGPSWSNASNDGNETTYDGPINGSYGPNGADG 192
DG+R HGA GP + A+ D E GP G GP G+ G
Sbjct: 672 DGARGAHGAVGAPGP--AGATGDRGEAGAAGPA-GPAGPRGSPG 712
>V00503-1|CAA23761.1| 740|Homo sapiens protein ( Human mRNA
encoding Pro-alpha-2 chain of type I procollagen. (major
part). ).
Length = 740
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 61 DGSRRPHGATYDDGPSWSNASNDGNETTYDGPINGSYGPNGADG 192
DG+R HGA GP + A+ D E GP G GP G+ G
Sbjct: 50 DGARGAHGAVGAPGP--AGATGDRGEAGAAGPA-GPAGPRGSPG 90
>J03464-1|AAB59374.1| 1366|Homo sapiens COL1A2 protein.
Length = 1366
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 61 DGSRRPHGATYDDGPSWSNASNDGNETTYDGPINGSYGPNGADG 192
DG+R HGA GP + A+ D E GP G GP G+ G
Sbjct: 672 DGARGAHGAVGAPGP--AGATGDRGEAGAAGPA-GPAGPRGSPG 712
>AF004877-1|AAB93981.1| 1366|Homo sapiens pro-alpha 2(I) collagen
protein.
Length = 1366
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 61 DGSRRPHGATYDDGPSWSNASNDGNETTYDGPINGSYGPNGADG 192
DG+R HGA GP + A+ D E GP G GP G+ G
Sbjct: 672 DGARGAHGAVGAPGP--AGATGDRGEAGAAGPA-GPAGPRGSPG 712
>Y10658-1|CAA71668.1| 1270|Homo sapiens nuclear DNA helicase II
protein.
Length = 1270
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 49 TSANDGSRRPHGATYDDGPSWSNASNDGNETTYDGPI-NGSYGPNGADGT 195
T DG R P A YD+G + + + Y G +G YG G G+
Sbjct: 1153 TRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGGYGGS 1202
>U03643-1|AAA03571.1| 235|Homo sapiens leukophysin protein.
Length = 235
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 49 TSANDGSRRPHGATYDDGPSWSNASNDGNETTYDGPI-NGSYGPNGADGT 195
T DG R P A YD+G + + + Y G +G YG G G+
Sbjct: 118 TRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGGYGGS 167
>L13848-1|AAB48855.1| 1279|Homo sapiens RNA helicase A protein.
Length = 1279
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 49 TSANDGSRRPHGATYDDGPSWSNASNDGNETTYDGPI-NGSYGPNGADGT 195
T DG R P A YD+G + + + Y G +G YG G G+
Sbjct: 1152 TRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGGYGGS 1201
>BC107881-1|AAI07882.1| 443|Homo sapiens DHX9 protein protein.
Length = 443
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 49 TSANDGSRRPHGATYDDGPSWSNASNDGNETTYDGPI-NGSYGPNGADGT 195
T DG R P A YD+G + + + Y G +G YG G G+
Sbjct: 326 TRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGGYGGS 375
>BC058896-1|AAH58896.1| 402|Homo sapiens DHX9 protein protein.
Length = 402
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 49 TSANDGSRRPHGATYDDGPSWSNASNDGNETTYDGPI-NGSYGPNGADGT 195
T DG R P A YD+G + + + Y G +G YG G G+
Sbjct: 285 TRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGGYGGS 334
>AL662837-2|CAI19277.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 9 protein.
Length = 1270
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 49 TSANDGSRRPHGATYDDGPSWSNASNDGNETTYDGPI-NGSYGPNGADGT 195
T DG R P A YD+G + + + Y G +G YG G G+
Sbjct: 1153 TRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGGYGGS 1202
>AL355999-1|CAH71701.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 9 protein.
Length = 1270
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 49 TSANDGSRRPHGATYDDGPSWSNASNDGNETTYDGPI-NGSYGPNGADGT 195
T DG R P A YD+G + + + Y G +G YG G G+
Sbjct: 1153 TRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGGYGGS 1202
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,035,728
Number of Sequences: 237096
Number of extensions: 1215407
Number of successful extensions: 2346
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2346
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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