Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_D18
(400 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 28 0.61
SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 27 0.81
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 2.5
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 25 3.3
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 4.3
SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces... 25 4.3
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 4.3
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 25 4.3
SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|ch... 25 5.7
SPBC1773.08c |||mannosyltransferase complex subunit |Schizosacch... 24 7.6
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 24 7.6
SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces pomb... 24 10.0
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch... 24 10.0
SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|... 24 10.0
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 27.9 bits (59), Expect = 0.61
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +3
Query: 186 LSIAVAKYITISTNN*QHVITSSVLQTAWVPYLNSLG 296
LSI+ AK TI + + + S++L T+W+ +LNS+G
Sbjct: 3546 LSISSAKLSTICRSVLKASVNSALL-TSWICFLNSIG 3581
>SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 580
Score = 27.5 bits (58), Expect = 0.81
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 57 TFLYNNEEQRLTYLTEDIGFNFILATTSTRTCLSGGVLRDMVTLSI-AVAKYITISTNN* 233
+ L + ++RLT L+ FILA + VL ++ +S+ A IT + +
Sbjct: 326 SLLISGRDERLTTLSATAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRT 385
Query: 234 QHVITSSVLQTAWVPYLNSLGTRLLRLVTI 323
H + W Y++ G LL + +
Sbjct: 386 LHSMAEQGHAPKWFKYVDREGRPLLAMAFV 415
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 25.8 bits (54), Expect = 2.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 272 GSIPEFSWYSPIKTGYYPLMTSYYFPFAQRP 364
G P+ +Y P + YYP +Y P +P
Sbjct: 107 GGYPQQPYYYPNQPNYYPAQPAYAQPVYAQP 137
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.4 bits (53), Expect = 3.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 104 RYRFQFHISYYFHSHLPFWWSSERY 178
R R +F Y + PFWW+S+R+
Sbjct: 1461 RVRTEFK-QYQLLKNNPFWWTSQRH 1484
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 215 NFYQQLTTRYYFERLTNGLGSIPEF 289
NFY + YF T G+ S+P F
Sbjct: 126 NFYPPIQNSTYFINATGGIDSMPYF 150
>SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 25.0 bits (52), Expect = 4.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 77 FIIVKESVGIVGVTHCFSFIP 15
FI VK +GIV T+C +F+P
Sbjct: 157 FIFVK-ILGIVSKTYCLAFVP 176
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.0 bits (52), Expect = 4.3
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +2
Query: 146 HLPFWWSSERYGNLKHRRGEI-YYNFYQQLTTRYYFERLTNGLGSIPEFSWYSP 304
H FWWS + NL E+ NF L FE N + EFS SP
Sbjct: 118 HQKFWWSLRKKRNLPKENSELDLSNFQDDLD----FE---NSISQKNEFSQKSP 164
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 25.0 bits (52), Expect = 4.3
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -1
Query: 364 RPLSEWEIV*SHQGIVTSLNR-----RVPREFRYGTQAVCKTLEVITC 236
RP + ++V SH+ I+++L + RVP YG KT ++ C
Sbjct: 30 RPANLEDVV-SHKDIISTLEKFISSNRVPHMLFYGPPGTGKTSTILAC 76
>SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 775
Score = 24.6 bits (51), Expect = 5.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 66 YNNEEQRLTYLTEDIGFNFILATTSTRTCLS 158
Y EQRL + + +G +L TCLS
Sbjct: 724 YKTVEQRLAEINKTLGEQLLLRRKQGATCLS 754
>SPBC1773.08c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 391
Score = 24.2 bits (50), Expect = 7.6
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 158 WWSSERYGNLKHRRGEIYYNFYQQL--TTRYYFER 256
+WS+ N K R E Y NF++ + T ++ ER
Sbjct: 282 FWSNFEIANFKFFRNEQYENFFRTMDATGGFWTER 316
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 24.2 bits (50), Expect = 7.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 251 RSNNVLLIVGRNCNIFRHG 195
R+N+ L+I G C +FR G
Sbjct: 963 RNNDFLIIYGIGCEVFRLG 981
>SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 933
Score = 23.8 bits (49), Expect = 10.0
Identities = 19/69 (27%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Frame = +3
Query: 30 AMCYANYSNTFLYNNEEQRLTYLTEDIGFNF---ILATTSTRTCLSGGVLRDMVTLSIAV 200
AM Y T Y E L Y +D+ NF I+A + V D + V
Sbjct: 579 AMAYYGLLRTKNYEKNENILIYEADDVKINFPQLIIAYLKHLEYVDAAVYLDYIACIPLV 638
Query: 201 AKYITISTN 227
Y S N
Sbjct: 639 PAYQACSIN 647
>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
Nak1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 23.8 bits (49), Expect = 10.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -1
Query: 190 LKVTISLRTPPERQVRVEVVANMKLKPISSVR*VNLCSS 74
L+V S+ PP + + ++ L+ SS ++ CSS
Sbjct: 526 LEVNRSISIPPPKSISPSILHKPSLESASSTPKISSCSS 564
>SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 23.8 bits (49), Expect = 10.0
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 245 YFERLTNGLGSIPEFSWYSP 304
YF+ LG+ F WY P
Sbjct: 349 YFDNSLENLGNYNSFIWYGP 368
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,665,119
Number of Sequences: 5004
Number of extensions: 32886
Number of successful extensions: 93
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 134126124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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