Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_D18
         (400 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047658-1|AAC04418.2|  348|Caenorhabditis elegans Hypothetical ...    29   1.6  
Z81587-2|CAB04702.2|  339|Caenorhabditis elegans Hypothetical pr...    27   3.7  
AL110487-11|CAC42369.1|  624|Caenorhabditis elegans Hypothetical...    27   3.7  
AL110487-10|CAC42368.1|  623|Caenorhabditis elegans Hypothetical...    27   3.7  
AL110487-9|CAB54435.1|  626|Caenorhabditis elegans Hypothetical ...    27   3.7  
AF031837-1|AAC13673.1|  624|Caenorhabditis elegans GLY5c protein.      27   3.7  
AF031836-1|AAC13672.1|  626|Caenorhabditis elegans GLY5b protein.      27   3.7  
AF031835-1|AAC13671.1|  623|Caenorhabditis elegans GLY5a protein.      27   3.7  
AC006757-4|AAF60545.1|  610|Caenorhabditis elegans Hypothetical ...    27   6.5  
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr...    26   8.7  

>AF047658-1|AAC04418.2|  348|Caenorhabditis elegans Hypothetical
           protein K03H6.2 protein.
          Length = 348

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +2

Query: 107 YRFQFHISYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYY 247
           Y F+   ++    HLPF +    +  + H R EI+YN    + + Y+
Sbjct: 251 YSFRIVHAHDMVPHLPFQYELVDHDKMYHHRTEIWYNNDMSIGSSYH 297


>Z81587-2|CAB04702.2|  339|Caenorhabditis elegans Hypothetical
           protein T06G6.2 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 15/70 (21%), Positives = 35/70 (50%)
 Frame = +3

Query: 141 TRTCLSGGVLRDMVTLSIAVAKYITISTNN*QHVITSSVLQTAWVPYLNSLGTRLLRLVT 320
           +R C S G+   + ++++ ++  + ++     +      ++T W   + S  TRL+ LV 
Sbjct: 11  SRRCASEGLTNALTSITVKMSSVLVVTVILLSYYFARLAIRTLWKNNIFSNSTRLILLVC 70

Query: 321 IP**LHTISH 350
           +   L++I H
Sbjct: 71  L---LNSIIH 77


>AL110487-11|CAC42369.1|  624|Caenorhabditis elegans Hypothetical
           protein Y39E4B.12c protein.
          Length = 624

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +2

Query: 122 HISYYFHSHLPFWWSSERYGNLKH---RRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFS 292
           H+ + F    P+ W +     LK    R  E++ + Y+     YY+ER+ N LG   + S
Sbjct: 401 HVGHVFRKRSPYKWRTG-VNVLKRNSIRLAEVWLDDYKT----YYYERINNQLGDFGDIS 455


>AL110487-10|CAC42368.1|  623|Caenorhabditis elegans Hypothetical
           protein Y39E4B.12b protein.
          Length = 623

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +2

Query: 122 HISYYFHSHLPFWWSSERYGNLKH---RRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFS 292
           H+ + F    P+ W +     LK    R  E++ + Y+     YY+ER+ N LG   + S
Sbjct: 401 HVGHVFRKRSPYKWRTG-VNVLKRNSIRLAEVWLDDYKT----YYYERINNQLGDFGDIS 455


>AL110487-9|CAB54435.1|  626|Caenorhabditis elegans Hypothetical
           protein Y39E4B.12a protein.
          Length = 626

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +2

Query: 122 HISYYFHSHLPFWWSSERYGNLKH---RRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFS 292
           H+ + F    P+ W +     LK    R  E++ + Y+     YY+ER+ N LG   + S
Sbjct: 401 HVGHVFRKRSPYKWRTG-VNVLKRNSIRLAEVWLDDYKT----YYYERINNQLGDFGDIS 455


>AF031837-1|AAC13673.1|  624|Caenorhabditis elegans GLY5c protein.
          Length = 624

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +2

Query: 122 HISYYFHSHLPFWWSSERYGNLKH---RRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFS 292
           H+ + F    P+ W +     LK    R  E++ + Y+     YY+ER+ N LG   + S
Sbjct: 401 HVGHVFRKRSPYKWRTG-VNVLKRNSIRLAEVWLDDYKT----YYYERINNQLGDFGDIS 455


>AF031836-1|AAC13672.1|  626|Caenorhabditis elegans GLY5b protein.
          Length = 626

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +2

Query: 122 HISYYFHSHLPFWWSSERYGNLKH---RRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFS 292
           H+ + F    P+ W +     LK    R  E++ + Y+     YY+ER+ N LG   + S
Sbjct: 401 HVGHVFRKRSPYKWRTG-VNVLKRNSIRLAEVWLDDYKT----YYYERINNQLGDFGDIS 455


>AF031835-1|AAC13671.1|  623|Caenorhabditis elegans GLY5a protein.
          Length = 623

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +2

Query: 122 HISYYFHSHLPFWWSSERYGNLKH---RRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFS 292
           H+ + F    P+ W +     LK    R  E++ + Y+     YY+ER+ N LG   + S
Sbjct: 401 HVGHVFRKRSPYKWRTG-VNVLKRNSIRLAEVWLDDYKT----YYYERINNQLGDFGDIS 455


>AC006757-4|AAF60545.1|  610|Caenorhabditis elegans Hypothetical
           protein Y40C7B.5 protein.
          Length = 610

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +3

Query: 42  ANYSNTFLYNNEEQRLTYLTEDIGFN-FILATTSTRTCLSGGVLRDMVTLSIAVAKYITI 218
           +N   +  YN E+++ T   +D+ FN  I+   S     + G++  ++  S  V K    
Sbjct: 131 SNAGYSIRYNKEDKKYTIGNKDVSFNQNIIKIDSDEYDATEGLMELLIKKSPNVNKIQKD 190

Query: 219 STNN*QHVITSS 254
            T+N Q ++  S
Sbjct: 191 DTSNYQKILVCS 202


>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical protein
            F22E10.1 protein.
          Length = 1318

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 11/48 (22%), Positives = 26/48 (54%)
 Frame = -1

Query: 217  IVIYFATAMLKVTISLRTPPERQVRVEVVANMKLKPISSVR*VNLCSS 74
            +++ FAT M+ +   +     +Q+R +    + ++ I SV+ + L +S
Sbjct: 909  MIVLFATMMISMAYKIARENLKQIRKDEAGKIAIEIIESVKTIQLLTS 956


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,021,009
Number of Sequences: 27780
Number of extensions: 174513
Number of successful extensions: 381
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)