Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_D15
         (494 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006830-3|AAP13735.1|  348|Caenorhabditis elegans Serpentine re...    30   1.1  
Z48009-7|CAA88083.1|  329|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z93378-5|CAB07584.3| 1229|Caenorhabditis elegans Hypothetical pr...    27   7.5  
AJ811574-1|CAH18872.1| 1229|Caenorhabditis elegans putative treh...    27   7.5  
AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans trehalose-6-p...    27   7.5  
L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human nie...    27   9.9  
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ...    27   9.9  

>AC006830-3|AAP13735.1|  348|Caenorhabditis elegans Serpentine
           receptor, class w protein3 protein.
          Length = 348

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = -3

Query: 450 LKLEIRALCCRNTPTGQVGIITKFIIT--ILWFSYDFFLQLFNNGFSHVTSPFSYPDV 283
           L +E+R    R    G+     K   T  +++ +  FF     NGFSHV + FSY +V
Sbjct: 226 LIIELRKAAKRRKNRGKSACDKKDSTTKLVIFVTISFFFLEVPNGFSHVVNGFSYGNV 283


>Z48009-7|CAA88083.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.10 protein.
          Length = 329

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 401 WPVGVFRQHRARISNFNLFTILYHIVT 481
           W +G F   ++ +  FNLF+IL  ++T
Sbjct: 171 WTIGCFAVSKSVVPRFNLFSILSTVLT 197


>Z93378-5|CAB07584.3| 1229|Caenorhabditis elegans Hypothetical protein
            F19H8.1 protein.
          Length = 1229

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -3

Query: 477  TMWYRIVNKLKLEIRALC 424
            T+W  + +KLK E+RALC
Sbjct: 1170 TIWVTVNDKLKEEVRALC 1187


>AJ811574-1|CAH18872.1| 1229|Caenorhabditis elegans putative trehalose
            6-phosphatesynthase protein.
          Length = 1229

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -3

Query: 477  TMWYRIVNKLKLEIRALC 424
            T+W  + +KLK E+RALC
Sbjct: 1170 TIWVTVNDKLKEEVRALC 1187


>AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans
            trehalose-6-phosphate synthase protein.
          Length = 1230

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -3

Query: 477  TMWYRIVNKLKLEIRALC 424
            T+W  + +KLK E+RALC
Sbjct: 1171 TIWVTVNDKLKEEVRALC 1188


>L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human
           niemann pick c disease)related protein 2 protein.
          Length = 1274

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -3

Query: 252 ICRLWVRTFFYI 217
           ICR+W+ TFF++
Sbjct: 821 ICRIWIATFFFV 832


>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
            protein R10F2.1 protein.
          Length = 2779

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -1

Query: 260  IKLSADSGSAPFFILEI 210
            +K+S+ SGSAPFF+L +
Sbjct: 2329 LKMSSWSGSAPFFVLPV 2345


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,772,584
Number of Sequences: 27780
Number of extensions: 162969
Number of successful extensions: 408
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)