BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_D15
(494 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 1.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 1.3
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 4.1
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 4.1
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 22 4.1
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 9.5
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 9.5
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 9.5
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 9.5
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 9.5
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 9.5
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.5
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 9.5
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 9.5
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 49 INNNKISVYKII*YIDIKNLIKVDLSSHM 135
INNN I++ + + D NL +VD+ ++M
Sbjct: 624 INNNYINLVRPNTFTDKVNLTRVDMYANM 652
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 34 SNNYVINNNKISVYKII*YID 96
SNNY NNN +Y I YI+
Sbjct: 314 SNNYYNNNNYKKLYYNINYIE 334
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 37 NNYVINNNKISVYKII*Y 90
NNY NNN + YK + Y
Sbjct: 102 NNYNYNNNNYNNYKKLYY 119
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 235 PHLFLYWRFKSTCVG 191
PHLFLY ST G
Sbjct: 369 PHLFLYPEVSSTYTG 383
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 362 GFLTIFSFNYLT 327
GFLT SF+YLT
Sbjct: 192 GFLTSCSFDYLT 203
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 362 GFLTIFSFNYLT 327
GFLT SF++LT
Sbjct: 201 GFLTTCSFDFLT 212
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 88 LSNNYNYNNN 97
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 85 LSNNYNYNNN 94
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 85 LSNNYNYNNN 94
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 85 LSNNYNYNNN 94
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 88 LSNNYNYNNN 97
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 63 NKCLQNNLIYRYKKFNKSRF 122
NK + NN Y+Y NK +
Sbjct: 87 NKTIHNNNNYKYNYNNKYNY 106
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 88 LSNNYNYNNN 97
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 88 LSNNYNYNNN 97
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 88 LSNNYNYNNN 97
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 88 LSNNYNYNNN 97
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 88 LSNNYNYNNN 97
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 88 LSNNYNYNNN 97
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 88 LSNNYNYNNN 97
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 88 LSNNYNYNNN 97
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 318 LSNNYNYNNN 327
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 321 LSNNYNYNNN 330
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 31 LSNNYVINNN 60
LSNNY NNN
Sbjct: 321 LSNNYNYNNN 330
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 362 GFLTIFSFNYLT 327
GFLT SF++LT
Sbjct: 201 GFLTTCSFDFLT 212
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 20.6 bits (41), Expect = 9.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 174 YYRQFFPTQVDLN 212
Y+ QF+ Q DLN
Sbjct: 190 YFHQFYKQQPDLN 202
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,942
Number of Sequences: 438
Number of extensions: 2362
Number of successful extensions: 25
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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