Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_D04
(604 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 262 4e-71
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 239 2e-64
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 114 1e-26
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 106 3e-24
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 98 8e-22
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 87 1e-18
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 83 4e-17
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 78 1e-15
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 77 3e-15
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 74 2e-14
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 70 2e-13
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 64 7e-12
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 65 9e-12
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 64 2e-11
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 58 1e-09
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 58 1e-09
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 53 3e-08
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 53 3e-08
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 53 3e-08
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 53 4e-08
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 52 5e-08
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 50 3e-07
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 46 4e-06
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 46 6e-06
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 42 7e-05
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 38 0.001
SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3 |Schi... 35 0.011
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 33 0.032
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 33 0.042
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 32 0.056
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 29 0.69
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 28 1.2
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 27 2.1
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 27 2.8
SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-phosphat... 26 4.9
SPAC1786.01c ||SPAC31G5.20c|triacylglycerol lipase|Schizosacchar... 25 6.4
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 6.4
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 25 6.4
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 25 6.4
SPCC1739.06c |||uroporphyrin methyltransferase |Schizosaccharomy... 25 8.5
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 262 bits (641), Expect = 4e-71
Identities = 119/177 (67%), Positives = 144/177 (81%)
Frame = +1
Query: 1 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 180
DP+RILV+K+ELTLEGIKQFY+A+E EEWKL+TLCDLY+T+++ QAVIFCNTRRKVDWLT
Sbjct: 216 DPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTLCDLYETVTVTQAVIFCNTRRKVDWLT 275
Query: 181 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 360
E + ERDFTVS+MHGDMDQ +R+ +M +FRTGSSR+LITTDLLARGIDVQQVS VINYDL
Sbjct: 276 EQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDL 335
Query: 361 PTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEFYHTSISEMPSDVANLI 531
P NRENY NFVT D R +++IE+FY+T I EMP ++A+LI
Sbjct: 336 PANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEEMPMNIADLI 392
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 239 bits (586), Expect = 2e-64
Identities = 109/177 (61%), Positives = 137/177 (77%)
Frame = +1
Query: 1 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 180
+PVRILV+++ELTLEG+KQ++IA+E EEWK +TLCDLYDTL+I QAVIFCN+RRKVDWLT
Sbjct: 218 NPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNSRRKVDWLT 277
Query: 181 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 360
E M E +FTV++MHG+M Q+ER+ IM+ FR G+SRVLI TD+ ARGIDVQQVS VINYDL
Sbjct: 278 EKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDL 337
Query: 361 PTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEFYHTSISEMPSDVANLI 531
P NRENY NFVT D R L+DIE++Y T I EMP ++ +++
Sbjct: 338 PANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDIEQYYSTVIDEMPMNIGDMV 394
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 114 bits (274), Expect = 1e-26
Identities = 59/175 (33%), Positives = 99/175 (56%), Gaps = 7/175 (4%)
Frame = +1
Query: 13 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 192
I ++ EEL++EGIKQ Y+ + EE K L +LY L+I Q++IFC + + + M
Sbjct: 314 IRLKTEELSVEGIKQLYMDCQSEEHKYNVLVELYGLLTIGQSIIFCKKKDTAEEIARRMT 373
Query: 193 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 372
TV+ + G+++ +R+ IM FR G+S+VL+TT+++ARGIDV QV+ V+NYD+P ++
Sbjct: 374 ADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNYDMPLDQ 433
Query: 373 ------ENYXXXXXXXXXXXXXXXXXNFVTEADR-RALKDIEEFYHTSISEMPSD 516
+ Y NFV + + I+E++ I+ +P+D
Sbjct: 434 AGRPDPQTYLHRIGRTGRFGRVGVSINFVHDKKSWEEMNAIQEYFQRPITRVPTD 488
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 106 bits (254), Expect = 3e-24
Identities = 57/164 (34%), Positives = 84/164 (51%)
Frame = +1
Query: 28 EELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFT 207
+ELTL G+ Q+Y ++ E K+ L L+ L I Q++IFCN+ +V+ L + + E ++
Sbjct: 249 DELTLRGVTQYYAFVD-ESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYS 307
Query: 208 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXX 387
H M Q R + FR G R L+ +DLL RGID+Q V+ VIN+D P N E Y
Sbjct: 308 CFYSHAKMLQSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLH 367
Query: 388 XXXXXXXXXXXXXXXNFVTEADRRALKDIEEFYHTSISEMPSDV 519
+F++ ADR L IE T I +P +
Sbjct: 368 RIGRSGRFGHRGLAISFISWADRFNLYRIENELGTEIQPIPPSI 411
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 98.3 bits (234), Expect = 8e-22
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Frame = +1
Query: 1 DPVRILVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 177
+P+ I V E +LTL G++Q Y+ +E E+ K + DL D+L Q VIF + + + L
Sbjct: 253 NPLEIYVDDETKLTLHGLQQHYVKLE-EKAKNRKINDLLDSLEFNQVVIFVKSVSRANEL 311
Query: 178 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 357
+ E +F +HG + Q ER + F+ R+ + TD+ RGID+++V+ VINYD
Sbjct: 312 DRLLRECNFPSICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYD 371
Query: 358 LPTNRENYXXXXXXXXXXXXXXXXXNF-VTEADRRALKDIEEFYHTSISEMPSDV 519
+P + ++Y F +E D + L I+E + +I+E+P ++
Sbjct: 372 MPDSPDSYLHRVGRAGRFGTKGLAITFSSSEEDSQILDKIQERFEVNITELPDEI 426
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 87.4 bits (207), Expect = 1e-18
Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 1/172 (0%)
Frame = +1
Query: 1 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI-AQAVIFCNTRRKVDWL 177
D V + V + T E I Q + +E E K L D+ TL +IF T+R D L
Sbjct: 388 DYVFLSVGRVGSTSENITQKVVHVEDSE-KRSYLLDILHTLPPEGLTLIFVETKRMADTL 446
Query: 178 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 357
T+ + +F +++HGD QRERE + FR+G + +++ T + +RG+D+ V+ VINYD
Sbjct: 447 TDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYD 506
Query: 358 LPTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEFYHTSISEMPS 513
LPT+ ++Y F ++ K++ E + E PS
Sbjct: 507 LPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECPS 558
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 82.6 bits (195), Expect = 4e-17
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 4/179 (2%)
Frame = +1
Query: 4 PVRILVQKEELTLEGIKQFYIAIELEEWK----LETLCDLYDTLSIAQAVIFCNTRRKVD 171
PV I V + ++Q + + EE K LE L +LY+ + ++F + + D
Sbjct: 624 PVEITVGGRSVVASEVEQI-VEVRPEESKFSRLLELLGELYNNQLDVRTLVFVDRQESAD 682
Query: 172 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVIN 351
L + +R +T +++HG DQ +R+ + ++ G VLI T ++ARG+DV+ + V+N
Sbjct: 683 ALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVN 742
Query: 352 YDLPTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEFYHTSISEMPSDVANL 528
YD P + E+Y F+T + DI + S +P ++ L
Sbjct: 743 YDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKELQTL 801
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 77.8 bits (183), Expect = 1e-15
Identities = 33/83 (39%), Positives = 54/83 (65%)
Frame = +1
Query: 133 QAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 312
+ +IF T+R D +T + + + A+HGD Q ER+ ++ +FRTG S +++ TD+ +
Sbjct: 371 KVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVAS 430
Query: 313 RGIDVQQVSCVINYDLPTNRENY 381
RGIDV+ ++ V NYD P N E+Y
Sbjct: 431 RGIDVKGITHVFNYDFPGNTEDY 453
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 76.6 bits (180), Expect = 3e-15
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Frame = +1
Query: 1 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIA-QAVIFCNTRRKVDWL 177
DP+RI+V ++ + I Q + + + K+ L + + + VIF + L
Sbjct: 245 DPIRIIVGLKDAATDSIDQRLLFVGSDTSKIVILRQMISNGELKPRVVIFVQDIERAKAL 304
Query: 178 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 357
+ + V +HG++ Q +RE + +FR G VLI TDLLARGID V VIN+D
Sbjct: 305 YTELLFDEIHVGVIHGELPQAKREEALAKFRKGEIWVLIATDLLARGIDFHGVKMVINFD 364
Query: 358 LPTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEFYHTSISEMPSDVANL 528
P + +Y F T+ D +K I +S E+P+ V L
Sbjct: 365 FPQSVHSYIHRIGRTGRAGNTGQAVTFFTKEDGEYIKLIAGVMRSSGCEVPNWVMAL 421
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 73.7 bits (173), Expect = 2e-14
Identities = 37/123 (30%), Positives = 64/123 (52%)
Frame = +1
Query: 136 AVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 315
A+IF N R + + + + V+ +H +M QRER + +FR ++++L+ TD+ +R
Sbjct: 261 AIIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASR 320
Query: 316 GIDVQQVSCVINYDLPTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEFYHTS 495
G+D+ V VIN+DLP + ++Y + VTE D + IE+ T
Sbjct: 321 GLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESISIVTERDVDLVHAIEDRVGTK 380
Query: 496 ISE 504
+SE
Sbjct: 381 LSE 383
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 70.1 bits (164), Expect = 2e-13
Identities = 45/171 (26%), Positives = 73/171 (42%)
Frame = +1
Query: 4 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 183
PVR+ V + T++ + Q Y+ + K L L + L+ +IF T L
Sbjct: 245 PVRVAVSSKFSTVDTLIQRYLFFPFKH-KDTYLVYLVNELAGNSIIIFARTVNDTQRLAI 303
Query: 184 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 363
+ F+ +HG + Q R + +F++G+ L+ TD+ ARG+D+ V VINYD+P
Sbjct: 304 LLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDIP 363
Query: 364 TNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEFYHTSISEMPSD 516
T+ + Y VT+ D IE + E D
Sbjct: 364 TDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFLRIEATIGKKMQEYEID 414
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 63.7 bits (148), Expect(2) = 7e-12
Identities = 31/115 (26%), Positives = 59/115 (51%)
Frame = +1
Query: 139 VIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 318
++F T+ V++++E + + ++VS ++G +DQ R + FR G + +L+ TD+ +RG
Sbjct: 350 LVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASRG 409
Query: 319 IDVQQVSCVINYDLPTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEF 483
ID+ ++ VINYD P + + + V D L D++ F
Sbjct: 410 IDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAGYLLDLQLF 464
Score = 21.4 bits (43), Expect(2) = 7e-12
Identities = 9/43 (20%), Positives = 20/43 (46%)
Frame = +1
Query: 1 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI 129
DPV + + E ++ + +++ E + LC L D + +
Sbjct: 268 DPVLVRLDVESKVSADLQSAFFSVKTAEREAALLCILQDIIKL 310
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 64.9 bits (151), Expect = 9e-12
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 2/159 (1%)
Frame = +1
Query: 4 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLY--DTLSIAQAVIFCNTRRKVDWL 177
PVR+ V ++ T + + Q ++ + + L +Y L + +IF ++ +
Sbjct: 461 PVRVFVDNKKTTAKLLTQEFVRVRPQRELLRPAMLIYLCKELFHRRTIIFFRSKAFAHKM 520
Query: 178 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 357
+ +HG + Q +R + FR G L+ TD+ +RGID++ + VINY+
Sbjct: 521 RVIFGLLSLNATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYE 580
Query: 358 LPTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDI 474
P E Y E DR+ LK +
Sbjct: 581 APATHEVYLHRVGRTARAGRSGRAITLAGEGDRKVLKGV 619
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 63.7 bits (148), Expect = 2e-11
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Frame = +1
Query: 139 VIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 318
+IF N +R ++ + + ++ + +HG Q +RE + Q R ++ +L+ TD+ RG
Sbjct: 520 IIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRG 579
Query: 319 IDVQQVSCVINYDLPTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEFYHTSI 498
ID+ VS V+NY++ + E+Y F+ D D+ S
Sbjct: 580 IDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTDVYYDLRVLLSRSA 639
Query: 499 -SEMPSDVAN 525
+ +P ++ N
Sbjct: 640 KAHIPDELRN 649
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 58.0 bits (134), Expect = 1e-09
Identities = 29/105 (27%), Positives = 46/105 (43%)
Frame = +1
Query: 196 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 375
R + V +HGDM Q R + F++G VL+ TD+ ARG+D+ +V VIN P E
Sbjct: 439 RKYNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIE 498
Query: 376 NYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEFYHTSISEMP 510
+Y F T D+ ++ + ++P
Sbjct: 499 DYVHRIGRTGRANTKGTAITFFTPQDKSHAGELVNVLRQAKQDIP 543
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 57.6 bits (133), Expect = 1e-09
Identities = 30/119 (25%), Positives = 60/119 (50%)
Frame = +1
Query: 25 KEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDF 204
K T+EG++Q Y+ ++ ++ L L L + ++F ++ V ++ E ++ D
Sbjct: 303 KPTSTVEGLEQGYVVVDSDKRFLLLFSFLKRNLK-KKVIVFMSSCASVKYMAELLNYIDL 361
Query: 205 TVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 381
V +HG Q+ R +F +L+ T++ ARG+D+ V ++ YD P + +Y
Sbjct: 362 PVLDLHGKQKQQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDY 420
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 53.2 bits (122), Expect = 3e-08
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 133 QAVIFCNTRRKVDWLTESMHERDF----TVSAMHGDMDQREREVIMRQFR--TGSSRVLI 294
+A+IFC T++ V+++ +H+ D V+ GD+ ER++ FR G +R++I
Sbjct: 1417 RAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMI 1476
Query: 295 TTDLLARGIDVQQVSCVINYDLPTNRENY 381
T GI+ V V++Y LP + +Y
Sbjct: 1477 ATKAFGLGINYMGVRLVVHYGLPASSMDY 1505
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 53.2 bits (122), Expect = 3e-08
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Frame = +1
Query: 37 TLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSA 216
T + QFY+ + L E KL+ L T + ++F ++ ++V ++ E+ +S
Sbjct: 254 TPSNLNQFYLTVPLTE-KLDILFGFIRTHLKFKTIVFLSSCKQVRFVYETFRRMRPGISL 312
Query: 217 MH--GDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 381
+H G Q R + +F + VL TD++ARG+D V VI D P + + Y
Sbjct: 313 LHLHGKQKQTTRTEVTAKFTSSRHVVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTY 369
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 53.2 bits (122), Expect = 3e-08
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 133 QAVIFCNTRRKVDWLTESMHERDF----TVSAMHGDMDQREREVIMRQFR--TGSSRVLI 294
+A+IFC T++ V+++ +H+ D V+ GD+ ER++ FR G +R++I
Sbjct: 1417 RAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMI 1476
Query: 295 TTDLLARGIDVQQVSCVINYDLPTNRENY 381
T GI+ V V++Y LP + +Y
Sbjct: 1477 ATKAFGLGINYMGVRLVVHYGLPASSMDY 1505
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 52.8 bits (121), Expect = 4e-08
Identities = 24/83 (28%), Positives = 45/83 (54%)
Frame = +1
Query: 133 QAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 312
+ ++F N + +T ++E +H +DQ++R + +F+ VL+ TD+ A
Sbjct: 391 KTMVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCTDVAA 450
Query: 313 RGIDVQQVSCVINYDLPTNRENY 381
RGID+ V+ VI+Y +P + Y
Sbjct: 451 RGIDIPSVTHVIHYHVPHTADMY 473
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 52.4 bits (120), Expect = 5e-08
Identities = 26/74 (35%), Positives = 44/74 (59%)
Frame = +1
Query: 160 RKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVS 339
R ++ + ES+++ F+ + + ER+ I+ +F TG +L+ +DL+ARGIDV
Sbjct: 449 RLLELIHESLNQ-SFSCGLFTSSLSRDERKKIISRFATGDLNLLVCSDLMARGIDVANTQ 507
Query: 340 CVINYDLPTNRENY 381
VINYD P + +Y
Sbjct: 508 NVINYDPPLSVRSY 521
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 49.6 bits (113), Expect = 3e-07
Identities = 25/102 (24%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Frame = +1
Query: 85 WKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM--HERDFTVSAMHGDMDQREREVIM 258
+K++ + L T+ +A++F ++ V++ ++ F + A+HG Q R
Sbjct: 242 YKVQCMIHLLCTIEYEKAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQSNRSRNF 301
Query: 259 RQFRTGSSR-VLITTDLLARGIDVQQVSCVINYDLPTNRENY 381
+F+ + + VL TTD+ +RG+D+ V V+ D P + +++
Sbjct: 302 EKFKKSNKKTVLFTTDIASRGLDIPNVDFVLQLDPPLDPKSF 343
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 46.0 bits (104), Expect = 4e-06
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Frame = +1
Query: 7 VRILVQKEELTLEGIKQFYIAIELEEW---KLETLCDLYDTLSIAQAVIFCNTRRKVDWL 177
+ L E T E + QF I +L++ L L L + ++ ++F T VD++
Sbjct: 249 INCLDPNEPPTHERVPQFVIETKLDKVFSSSLSLLQQLTSSNPSSRIIVFLPTISMVDFV 308
Query: 178 TESMHER-DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 354
+ +H + +R I FR S +L TD++ARG+D ++ V+
Sbjct: 309 GGVLENHLKIPCFILHSGLTTAQRRSITESFRKCQSGILFATDVVARGMDFPNITQVVQI 368
Query: 355 DLPTNRENY 381
P+N ++Y
Sbjct: 369 TGPSNTDDY 377
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 45.6 bits (103), Expect = 6e-06
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +1
Query: 208 VSAMHGDMDQREREVIMRQFRTGS---SRVLITTDLLARGIDVQQVSCVINYDLPTNREN 378
V +HG + Q+ R + F + S +L+ TD+ ARG+D+ V V+ YD P + ++
Sbjct: 470 VYRLHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDD 529
Query: 379 YXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEFYHTSISEMPSDVANLI 531
Y F+ + + ++ +I E P+ + L+
Sbjct: 530 YLHRIGRTARAGHNGAAIMFLLPKESEYINLLKSSVSANILEQPNGPSGLL 580
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 41.9 bits (94), Expect = 7e-05
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +1
Query: 139 VIFCNTRRKVDWLTESMHERDFTVSAMH--GDMDQREREVIMRQFRTGSSRVLITTDLLA 312
+I+C +R + + + D+ + A H +++ ER+ I ++++GS ++++ T
Sbjct: 746 IIYCLSRTSCEQVAAKLRN-DYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFG 804
Query: 313 RGIDVQQVSCVINYDLPTNRENY 381
G+D V VI++ P + E Y
Sbjct: 805 MGVDKGDVRFVIHHSFPKSLEGY 827
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 37.9 bits (84), Expect = 0.001
Identities = 12/25 (48%), Positives = 22/25 (88%)
Frame = +1
Query: 307 LARGIDVQQVSCVINYDLPTNRENY 381
+ARG+D + V+CV+N+D+P+N ++Y
Sbjct: 386 VARGLDFENVACVLNFDMPSNTKSY 410
>SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 606
Score = 34.7 bits (76), Expect = 0.011
Identities = 18/83 (21%), Positives = 37/83 (44%)
Frame = +1
Query: 130 AQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 309
+ ++FC + + + A+ G+ + ERE +++ FR VL+ +L
Sbjct: 266 SSTLVFCINVEHSLKVCNAFRKLGIDARALFGETNDSERETLIQDFRKKKFPVLVNCMVL 325
Query: 310 ARGIDVQQVSCVINYDLPTNREN 378
G D+ + C++ PT+ N
Sbjct: 326 TEGTDIPNIDCLM-IARPTSSPN 347
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 33.1 bits (72), Expect = 0.032
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 229 MDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 357
M Q+ + ++QF+ G LI T + G+D+ +V +I YD
Sbjct: 476 MSQKLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYD 518
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 32.7 bits (71), Expect = 0.042
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 211 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 357
SA M+Q +++ + QFR G L+ T + G+D+ +I YD
Sbjct: 509 SAYSTGMNQMQQKETIDQFRAGVINTLVATSIGEEGLDIGDTDMIICYD 557
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 32.3 bits (70), Expect = 0.056
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 229 MDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 360
M R ++ + +F+TG VLI T + GIDV + VI +++
Sbjct: 407 MTFRRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSCNLVIRFNI 450
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 28.7 bits (61), Expect = 0.69
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -2
Query: 594 LINIAIERRTQSIDQINVDT-SDEVGHITGHFRNTSVIELLNILERSPVRFRDKVD 430
+ N + + T I+ V + SDE HI R +EL +LER P+ R+++D
Sbjct: 1038 IYNRLLMQTTSFIELFRVFSFSDEFKHIP--VREEEKVELAKLLERVPIPIRERLD 1091
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 27.9 bits (59), Expect = 1.2
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = -2
Query: 579 IERRTQSIDQINVDTSDEVGHITGHFRNT-----SVIELLN---ILERSPVRFRDKVDGN 424
IE R ++ D + TS+E H + +V+E N ++ SP+ + G
Sbjct: 46 IEERIKACDA-GIQTSEEQKKELEHTMQSLEMIINVLEKANEKPVITNSPLTRSRRNRGT 104
Query: 423 SFTAETTTSSDSMNVVFAI 367
SFTA T T + M+V F +
Sbjct: 105 SFTANTVTFTPGMSVAFKL 123
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +2
Query: 452 TGERSRILRSSITLVFRKCPVMWPTSSEVSTFIWSILCVLRSIAIFIRRSY 604
TGE S+I +++ V K P M ++ + FI++++ S+AI+ +Y
Sbjct: 547 TGEESKIRMNAVRNVSVKAPSMQKVTNRIVIFIFALVV---SMAIYCTAAY 594
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 1 DPVRILVQKEELTLEGIKQFYIAIELEEW 87
DP R V+KE+LT G+ + A + + W
Sbjct: 67 DPARNFVEKEDLTALGVNVYNNADDWKNW 95
>SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-
phosphatidyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 110 YMTHSLLHRLLFSATPVVR*TG*PSLCMSATSPCRPCTVTWTS 238
+ TH L +L F P + + S+ +S+TSP P T+ W +
Sbjct: 190 FKTHFLFSQLSFECIPHLSDS---SIQLSSTSPVIPFTLKWNN 229
>SPAC1786.01c ||SPAC31G5.20c|triacylglycerol
lipase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 79 EEWKLETLCDLYDTLSIAQAVI--FCNTRRKVDW 174
+EWKL+ + D YD ++ QAV R + DW
Sbjct: 143 DEWKLDPVYDYYD-YTLVQAVYSSLVKHREQKDW 175
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 521 PTSSEVSTFIWSILCVLRSIA 583
PTS S WSI+C LR +A
Sbjct: 1050 PTSGLDSQSAWSIVCFLRKLA 1070
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 151 NTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRV 288
N ++ TES +R V + D + +R+ R+F G RV
Sbjct: 25 NNKKSRTRSTESHEDRQAKVQKIQSDFNLFDRQFTKRKFDVGGRRV 70
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 25.4 bits (53), Expect = 6.4
Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 187 MHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID-VQQVSCVIN 351
+H++ V GD + + ++ + + TG +RV++TT L RG++ VQ + +++
Sbjct: 257 LHQKPHPVFERLGDDLKAKLKISLAEALTGFNRVILTT-LDGRGLEYVQPIGKILH 311
>SPCC1739.06c |||uroporphyrin methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 546 NVDTSDEVGHITGHFRNTSVIELLNILERSPVR 448
+ D +VGH+ + + IE+L I E PVR
Sbjct: 43 SADGGFDVGHLQLDAKKSDAIEILPISEFDPVR 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,433,112
Number of Sequences: 5004
Number of extensions: 46367
Number of successful extensions: 146
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 264253462
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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