Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_D01
         (369 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein.                 28   8.2  
AC006316-1|AAD29127.1| 2126|Homo sapiens unknown protein.              28   8.2  

>U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein.
          Length = 3460

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +2

Query: 128  LCTTSSSHMSRVQGT*GHLSIHYHIRTCPYHLMVLDIVHKSFLYTCTSVNF 280
            LC  SSSH+S +  T  H S  Y+  T        ++VH   L+ C SV F
Sbjct: 2057 LCYHSSSHVSSLCSTEHHPSSTYYAGTMQGWRR--EVVHFGKLHLCGSVRF 2105


>AC006316-1|AAD29127.1| 2126|Homo sapiens unknown protein.
          Length = 2126

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +2

Query: 128  LCTTSSSHMSRVQGT*GHLSIHYHIRTCPYHLMVLDIVHKSFLYTCTSVNF 280
            LC  SSSH+S +  T  H S  Y+  T        ++VH   L+ C SV F
Sbjct: 1627 LCYHSSSHVSSLCSTEHHPSSTYYAGTMQGWRR--EVVHFGKLHLCGSVRF 1675


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,894,835
Number of Sequences: 237096
Number of extensions: 1078841
Number of successful extensions: 6029
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6029
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)