Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_D01
         (369 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   3.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   4.6  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   4.6  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   6.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   8.1  

>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 212 PYHLMVLDIVHKSFLY 259
           P HL VL I  K F+Y
Sbjct: 411 PTHLKVLTIEEKPFVY 426


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 361  SVCFDTMPLGFPFD 320
            ++  D  PLGFP D
Sbjct: 965  AISLDGKPLGFPLD 978


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = +3

Query: 9   YYVFLYFQKMLVYLFDYLNINQKEVSTFSSMSSELIKHDVFVRPVHHTCQE 161
           +Y++LY  K L+Y+   L +       F S   +     + +  + HT Q+
Sbjct: 110 HYLWLYHDKTLLYM-SKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQD 159


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 314 KFICVLSSQTT*SSPTCKYTERTY 243
           +F C  +      S +CKY E+ Y
Sbjct: 3   QFHCAAAEGQAKKSFSCKYCEKVY 26


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 24  YFQKMLVYLFDYLNINQKEVSTFSSMS 104
           ++  MLV LF Y  I    VST  +++
Sbjct: 256 FYIPMLVMLFFYWRIYNAAVSTTKAIN 282


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,055
Number of Sequences: 438
Number of extensions: 2133
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)