Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_C24
         (367 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical...    29   1.3  
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr...    28   1.8  
AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical ...    28   2.4  
AF039041-8|AAB94189.2|  448|Caenorhabditis elegans Hypothetical ...    26   7.2  
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ...    26   7.2  
AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical ...    26   7.2  
Z68315-5|CAE48501.1|  689|Caenorhabditis elegans Hypothetical pr...    26   9.5  
AF068721-2|AAC19262.1|  396|Caenorhabditis elegans Hypothetical ...    26   9.5  

>AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical
           protein Y62E10A.16 protein.
          Length = 496

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 85  RLLLFSTCSTMLKTLKPSTRVPLSLV 162
           R+  F TCS  +KT+K    +PLS+V
Sbjct: 290 RIEQFLTCSETIKTVKSDALIPLSIV 315


>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical
           protein C27B7.7 protein.
          Length = 1471

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 13/56 (23%), Positives = 29/56 (51%)
 Frame = +1

Query: 124 TLKPSTRVPLSLVCT*MRDSSCTHIILQLSSAMILMDSFYQLLMKFIHNSSLIWTL 291
           T  P T  PLS+ CT ++  S   ++ +++   + +DS +  ++  +H   +  T+
Sbjct: 256 TADPQTNEPLSITCT-VKSVSKASVLWKVNGIKVSVDSSFYTVVTSVHEDFIESTI 310


>AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical
           protein F37B4.7 protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +3

Query: 60  IFYQKLREEAIALFHLFYYAKDFETFYKSA-AFARVHLNEGQFLYAYYIA 206
           +FY       IA F  + Y K  +T YKSA AF R  L  G+FL AY +A
Sbjct: 101 VFYGWATATEIAYF-AYIYVKVPKTEYKSATAFTRAALLVGRFL-AYALA 148


>AF039041-8|AAB94189.2|  448|Caenorhabditis elegans Hypothetical
           protein W03F8.2 protein.
          Length = 448

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 24  RIGYLPKYYEFSIFYQKLREEAIALFHLFYYAKDFET 134
           +I  +P+  +FSI  +KLRE     +H F+  +D +T
Sbjct: 158 KISIVPEKEDFSILEKKLRE--FNFYHGFFPREDLQT 192


>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
            protein D1007.15 protein.
          Length = 1184

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
 Frame = +1

Query: 157  LVCT*MRDSSCTHIIL------QLSSAMILMDSFYQLLMKFIHNSSLIWTLYLRFIALKC 318
            +VC   R SS  H +L       L S  ILM +F+ L + F H+ +++ T +L    L  
Sbjct: 911  IVCARHRMSSFRHSLLFILYASLLYSVTILMSTFFFLPIIFTHSQTIL-TSFLHIPVLFL 969

Query: 319  KTVFFTMQ 342
             T+F + +
Sbjct: 970  GTLFTSFE 977


>AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical
            protein Y46E12BL.2 protein.
          Length = 1334

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = -3

Query: 263  INFIRSW*NE---SMSIIALDNCNIIC--VQELSLI*VHTSESGTLVEGFKVFSIVEQVE 99
            I+F  SW  E   ++ I+A+    ++C  + E+ L         T+ EG     +  +V 
Sbjct: 957  ISFACSWIGEGRAAVRILAIRLMRVLCQKIPEVMLQQFREQILTTVFEGQLTSDLTIKVR 1016

Query: 98   KSNSLFP*LLVEDGELIVLGKITD 27
            K+N L   +LVE   + VL K T+
Sbjct: 1017 KANRLLLEVLVEKFGVNVLQKYTE 1040


>Z68315-5|CAE48501.1|  689|Caenorhabditis elegans Hypothetical
           protein F28C6.4b protein.
          Length = 689

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 17/64 (26%), Positives = 27/64 (42%)
 Frame = +1

Query: 106 CSTMLKTLKPSTRVPLSLVCT*MRDSSCTHIILQLSSAMILMDSFYQLLMKFIHNSSLIW 285
           C  +L  + P +++ L LV   M        +  +    + M SF+   +  I N SL W
Sbjct: 593 CLPLLLAIVPVSQILLLLVIYNMGKLFSKLNLGSVEFVTLCMSSFFYTFINIIFNISLRW 652

Query: 286 TLYL 297
           T  L
Sbjct: 653 TFEL 656


>AF068721-2|AAC19262.1|  396|Caenorhabditis elegans Hypothetical
           protein ZK1055.4 protein.
          Length = 396

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 42  KYYEFSIFYQKLREEAIALFHLFYYAKDFETFYKSAAFAR 161
           KYY+ +I   K   +     ++    KDFE F K   F R
Sbjct: 101 KYYDIAISTVKCYAKIQGYHYILAVEKDFECFQKDQFFRR 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,025,781
Number of Sequences: 27780
Number of extensions: 149104
Number of successful extensions: 345
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)