Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_C23
(584 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 72 4e-13
11_02_0012 - 7346282-7347136,7347234-7347593 66 2e-11
05_06_0044 - 25150322-25151260 65 3e-11
11_01_0771 + 6453130-6454488 65 4e-11
11_02_0011 - 7337618-7338496,7338596-7338991 62 3e-10
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 62 3e-10
11_01_0767 + 6438648-6438809,6439146-6440000 59 3e-09
04_04_0620 + 26656072-26656417,26656585-26657396 56 2e-08
04_04_0619 + 26652923-26653267,26653440-26654273 53 2e-07
01_01_1152 + 9170628-9171899 53 2e-07
01_06_0824 - 32243495-32244319,32244449-32244859 51 6e-07
11_01_0750 - 6315126-6315896,6316371-6316784 50 1e-06
01_07_0288 + 42534552-42534558,42535302-42537280,42537367-425375... 33 0.13
07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,256... 33 0.22
11_03_0128 - 10437407-10438049,10438097-10438272 29 3.6
03_05_0034 + 20064750-20065001,20065542-20065730,20066313-200665... 29 3.6
12_02_0674 - 21745321-21746223,21746229-21747608 28 6.3
03_02_0069 + 5401789-5401965,5403514-5403568,5403674-5405649,540... 28 6.3
08_02_0600 - 19166283-19166851,19166988-19168839,19169347-191694... 27 8.3
02_01_0088 - 627825-628984,629339-629509,629612-630416 27 8.3
01_06_0145 + 26964898-26965169,26965319-26965400,26966131-269663... 27 8.3
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 71.7 bits (168), Expect = 4e-13
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 10/186 (5%)
Frame = +2
Query: 2 DFHVDSKTTVKKPTMHLQEQLPYTENKELGARLIELPYSEDG----FRMVVVLPDKLDGL 169
+FH+ +V+ P M ++ L ++++LPY + G F M ++LP+ DGL
Sbjct: 269 EFHLLDGKSVQAPFMSTSKKQYILSYDNL--KVLKLPYQQGGDKRQFSMYILLPEAQDGL 326
Query: 170 KSVLQKA-AERGLLEDVFRLQPTSAAVNLELPKFEVKSGLDLNNLLPEIGVSKIF-DEAA 343
S+ +K +E LE + + +LPKF++ G + ++LL +G+ F EA
Sbjct: 327 WSLAEKLNSEPEFLEKHIPTRQVTVG-QFKLPKFKISFGFEASDLLKSLGLHLPFSSEAD 385
Query: 344 RGIVVDS----SLKVSKVFQEAFIKVDEEGATAGAFTGLIAVPKMEVLNPPPPLDFKVDR 511
+VDS +L VS VF ++F++V+EEG A A T + + + + P DF D
Sbjct: 386 LTEMVDSPEGKNLFVSSVFHKSFVEVNEEGTEAAAATAAV----ITLRSAPIAEDFVADH 441
Query: 512 PFAYFI 529
PF + I
Sbjct: 442 PFLFLI 447
Score = 70.1 bits (164), Expect = 1e-12
Identities = 58/186 (31%), Positives = 98/186 (52%), Gaps = 10/186 (5%)
Frame = +2
Query: 2 DFHVDSKTTVKKPTMHLQEQLPYTENKELGARLIELPYSEDG----FRMVVVLPDKLDGL 169
+FH+ +V+ P M +++ + L ++++LPY + G F M ++LP+ DGL
Sbjct: 521 EFHLLDGESVQAPFMSTRKKQYLSSYDSL--KVLKLPYLQGGDKRQFSMYILLPEAQDGL 578
Query: 170 KSVLQKA-AERGLLEDVFRLQPTSAAVNLELPKFEVKSGLDLNNLLPEIGVSKIFDEAAR 346
S+ +K +E +E+ ++P +LPKF++ G + LL +G+ +F
Sbjct: 579 WSLAEKLNSEPEFMENHIPMRPVHVG-QFKLPKFKISFGFGASGLLKGLGLPLLFGSEVD 637
Query: 347 GI-VVDS----SLKVSKVFQEAFIKVDEEGATAGAFTGLIAVPKMEVLNPPPPLDFKVDR 511
I +VDS +L VS VF ++FI+V+EEG A T + V ME + P L+F D
Sbjct: 638 LIEMVDSPGAQNLFVSSVFHKSFIEVNEEGTEA---TAAVMV-SME-HSRPRRLNFVADH 692
Query: 512 PFAYFI 529
PF + I
Sbjct: 693 PFMFLI 698
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 66.1 bits (154), Expect = 2e-11
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 13/162 (8%)
Frame = +2
Query: 113 YSED-GFRMVVVLPDKLDGLKSVLQK--AAERGLLEDVFRL--QPTSAAV---NLELPKF 268
Y E+ G M + LPD DGL +++ K A G F +P + +L +P+F
Sbjct: 236 YGENVGLSMYIFLPDARDGLPALVDKMAVASSGTASSSFLRDHRPGRRRIKVGDLRVPRF 295
Query: 269 EVKSGLDLNNLLPEIGVSKIFDEAA---RGIVVDSSLKVSKVFQEAFIKVDEEGATAGAF 439
+V ++N +L +G+ FD G++ + V KV A ++V+EEG A A
Sbjct: 296 KVSFYSEMNEVLKGMGIGAAFDVGKVDLSGMIDGELVVVEKVMHRAVVEVNEEGTEAAAA 355
Query: 440 TGLIAVPKMEVLNPPPPLDFKVDRPFAYFILHK--DKIIXAG 559
T K L P+DF D PFA+F++ + D ++ AG
Sbjct: 356 TA--CTMKFLCLTLTSPVDFVADHPFAFFVVEEKSDAVLFAG 395
>05_06_0044 - 25150322-25151260
Length = 312
Score = 65.3 bits (152), Expect = 3e-11
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 17/196 (8%)
Frame = +2
Query: 2 DFHVDSKTTVKKPTMHLQEQLPYTE-NKELGARLIELPYSEDG-------FRMVVVLPDK 157
DFHV V+ P M Q + + G ++ + Y G F M + LPD
Sbjct: 103 DFHVSPDHDVRVPFMAGSHQHAFMDVGCHPGFNVLRMMYRTGGAAGGDKMFAMYIYLPDD 162
Query: 158 LDGLKSVLQKAAERG---LLEDVFRLQPTSAAVNLELPKFEVKSGLDLNNLLPEIGVSKI 328
DGL + +K A L + QP + L++PKFEV ++ + LL E G+
Sbjct: 163 RDGLPELARKLASNPAAFLRRTIVPAQPVAVG-ELKIPKFEVSLKVEASRLLREFGLDLP 221
Query: 329 F----DEAARGIVVD--SSLKVSKVFQEAFIKVDEEGATAGAFTGLIAVPKMEVLNPPPP 490
F D + G+++D VS + + F+ V+EEG A A G + +
Sbjct: 222 FLPAADNSFSGMLLDPPQGTAVSSLLHQCFVNVNEEGTVAAA--GTVGEIMGFAMPDDQI 279
Query: 491 LDFKVDRPFAYFILHK 538
+DF D PF +FI+ +
Sbjct: 280 VDFVADHPFLFFIVEE 295
>11_01_0771 + 6453130-6454488
Length = 452
Score = 64.9 bits (151), Expect = 4e-11
Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Frame = +2
Query: 128 FRMVVVLPDKLDGLKSVLQKAAER-GLLEDVFRLQPTSAAVNLELPKFEVKSGLDLNNLL 304
+ M + LPD DGL+ ++++ A R G L + +PKF+V G + L
Sbjct: 294 YAMAIFLPDARDGLRGLVERMASRPGFLHEHMPAAWPVPVGEFRVPKFKVSCGGSVVGAL 353
Query: 305 PEIGVSKIFD-EAA--RGIVVDSS----LKVSKVFQEAFIKVDEEGATAGAFTGLIAVPK 463
++G+ F E A +V D L V + +A I+V+EEG A A T +P
Sbjct: 354 EQLGLRLPFSPELADLSDMVEDDGSGWPLFVGDIQHKAVIEVNEEGTVAAAATMTRMLPS 413
Query: 464 MEVLNPPPPLDFKVDRPFAYFILHK--DKIIXAG 559
PPPP+DF + PFAYFI+ + ++ AG
Sbjct: 414 GV---PPPPVDFVAEHPFAYFIVEEMSSAVVFAG 444
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 62.1 bits (144), Expect = 3e-10
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Frame = +2
Query: 125 GFRMVVVLPDKLDGLKSVLQKAAERGLLEDVFR-LQPTSAAV--NLELPKFEVKSGLDLN 295
G M + LPD+ DGL +++ K A R +PT +L +P+F+V +N
Sbjct: 261 GLSMYIFLPDERDGLPALVDKMAASSSSSSFLRDHRPTRRREVGDLRVPRFKVSFYSQIN 320
Query: 296 NLLPEIGVSKIFD--EA-----ARGIVV-DSSLKVSKVFQEAFIKVDEEGATAGAFTGLI 451
+L +GV+ FD EA A G+ L V +VF A ++V+EEG A A T
Sbjct: 321 GVLQGMGVTAAFDAGEADLSGMAEGVDQRGGGLVVEEVFHRAVVEVNEEGTEAAASTACT 380
Query: 452 AVPKMEVLNPPPPLDFKVDRPFAYFILHK 538
+ +L+ P DF D PFA+F++ +
Sbjct: 381 ----IRLLSMSYPEDFVADHPFAFFVVEE 405
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 62.1 bits (144), Expect = 3e-10
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Frame = +2
Query: 95 RLIELPYSEDG----FRMVVVLPDKLDGLKSVLQKA-AERGLLEDVFRLQPTSAAVNLEL 259
++++LPY + F M ++LP+ DGL S+ K +E LE + + +L
Sbjct: 90 KVLKLPYQKGRDLRQFSMYILLPEAQDGLWSLAAKLNSEPEFLEKRIPTRQVTVG-KFKL 148
Query: 260 PKFEVKSGLDLNNLLPEIGVSKIFDEAA--RGIVVD---SSLKVSKVFQEAFIKVDEEGA 424
PKF++ G + ++LL +G+ F A G+V +L VS +F ++F++VDEEG
Sbjct: 149 PKFKISFGFEASDLLKILGLQLPFSSKADLTGMVGSPERHNLFVSSLFHKSFVQVDEEGT 208
Query: 425 TAGAFTGLIAVPKMEVLNPPPPLDFKVDRPFAYFI 529
A A + + + + P +DF D PF + I
Sbjct: 209 EAAAASAAV----VSFRSAPVTVDFVADHPFLFLI 239
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 58.8 bits (136), Expect = 3e-09
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Frame = +2
Query: 59 QLPYTENKELGARLIELPYSEDGFRMVVVLPDKLDGLKSVLQKAAERGLLEDVFRLQPTS 238
+LPY + ++L YS F M+V LPD DGL +L + D L P
Sbjct: 148 RLPYKATSD--TYNLKLRYSLPSFAMLVFLPDDRDGLPGLLDRITASPEFVDE-HLPPGC 204
Query: 239 AAV-NLELPKFEVK-SGLDLNNLLPEIGVSKIFDEAA---RGIVV-----DSSLKVSKVF 388
V +PKF++ + ++L +G+ FD A GI V D+++ VS V
Sbjct: 205 VPVGRFRVPKFKLAFCHYGIADVLRGLGLRLPFDMFAAEMSGIAVEGDGEDAAMFVSSVI 264
Query: 389 QEAFIKVDEEGATAGAFT-----GLIAVPKMEVLNPPPPL-DFKVDRPFAYFILHK--DK 544
+ ++V+EEG+ A A+T L + PPP L DF D PFA+FI+ +
Sbjct: 265 HKVVVEVNEEGSEAAAYTEESDDDLGCSLYDDDYTPPPKLVDFVADHPFAFFIVEERSQA 324
Query: 545 IIXAG 559
I+ AG
Sbjct: 325 IVFAG 329
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 56.0 bits (129), Expect = 2e-08
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Frame = +2
Query: 101 IELPYSEDGFRMVVVLPDKLDGLKSVLQKAAERGLLEDVFRLQPTSAAV--NLELPKFEV 274
++ + F M+V LP K DGL+ +L+ A + V R P S + ++PKF+
Sbjct: 212 VDFGFGAPCFCMLVFLPIKRDGLRHLLRMAVTEP--DFVTRCVPRSRQIVTPCKVPKFKF 269
Query: 275 KSGLDLNNLLPEIGVSKIFDEAARGI------VVDSSLKVSKVFQEAFIKVDEEGATAGA 436
S LD L ++G+ FD A + + L VS + Q+ ++VDEEG TA
Sbjct: 270 SSQLDAGGALAQLGLGAPFDPDAADLSRMAVNTPPAGLYVSTMRQKCAVEVDEEGTTAVE 329
Query: 437 FTGLIAVPKMEV-LNPP--PPLDFKVDRPFAYFILHKDK 544
+ P PP PP+ F + PF + I+ K
Sbjct: 330 AMYSPSSPGYSPGYQPPRPPPMSFVAEHPFMFAIVEYKK 368
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 52.8 bits (121), Expect = 2e-07
Identities = 47/151 (31%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Frame = +2
Query: 128 FRMVVVLPDKLDGLKSVLQKAAERGLLEDVFRLQPTSA--AVNLELPKFEVKSGLDLNNL 301
F M+V LP K DGL+ +L+ A + V R P S +PKF+ S LD
Sbjct: 228 FCMLVFLPIKRDGLRHLLRMAVTEP--DFVMRCVPRSEQEVSPCMVPKFKFSSELDARGA 285
Query: 302 LPEIGVSKIFDEAARGI--------VVDSSLKVSKVFQEAFIKVDEEGATAGAFTGLIAV 457
L ++G+ FD A + L VS + Q+ ++VDEEG TA T
Sbjct: 286 LAKLGLGAPFDPLAADLSRMAVSVNTPPERLYVSAMRQKCAVEVDEEGTTAVEATYSCCS 345
Query: 458 PKME-VLNPPP-PLDFKVDRPFAYFILHKDK 544
P +P P P+ F + PF + I+ +K
Sbjct: 346 PTYSGPESPKPRPMSFVAEHPFMFAIVEYEK 376
>01_01_1152 + 9170628-9171899
Length = 423
Score = 52.8 bits (121), Expect = 2e-07
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 6/143 (4%)
Frame = +2
Query: 128 FRMVVVLPDKLDGLKSVLQKAAERGLLEDVFRLQPTSAAV----NLELPKFEVKSGLDLN 295
F M+++LPD LK L + + F + T AA L +PKF+ +
Sbjct: 269 FYMLLLLPDGDGALK--LADLYDMAVTTPEFIKKHTPAAEAPVRRLMVPKFKFSFKFEAK 326
Query: 296 NLLPEIGVSKIFDEAA-RGIVVDSS-LKVSKVFQEAFIKVDEEGATAGAFTGLIAVPKME 469
+ + ++GV++ F G+V L +++V+ +A I+VDE G A A T ++ + K
Sbjct: 327 SDMRKLGVTRAFAGGDFSGMVTGGDGLFIAEVYHQATIEVDELGTVAAASTAVVMMQKGS 386
Query: 470 VLNPPPPLDFKVDRPFAYFILHK 538
L PP+DF DRPF + ++ +
Sbjct: 387 SL---PPVDFVADRPFLFAVVEE 406
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 51.2 bits (117), Expect = 6e-07
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Frame = +2
Query: 89 GARLIELPYSEDG----------FRMVVVLPDKLDGLKSVLQKAAE--RGLLEDVFRLQP 232
G +++ LPY+ G F M + LPD+ GL +L+K L+E L
Sbjct: 224 GYKVLRLPYARGGRGRGRDTGRLFSMYIYLPDERHGLPDMLRKLCSDPAALIESSAALTE 283
Query: 233 TSAAVNLELPKFEVKSGLDLNNLLPEIGVSKIFDEAARGI--VVDSS-----LKVSKVFQ 391
+P+F + + L ++G+ F+ + +V+SS + VS V+
Sbjct: 284 KVPVGAFMVPRFTLSYKTNAAETLRQLGLRLPFEYPGADLSEMVESSPEAEKIVVSAVYH 343
Query: 392 EAFIKVDEEGATAGAFTGLIAVPKMEVLNPP-PPLDFKVDRPFAYFI 529
E+F++V+EEG A A T ++ + P +DF D PF + I
Sbjct: 344 ESFVEVNEEGTEAAAATAVVMTLGCAAPSAPVHVVDFVADHPFMFLI 390
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 50.4 bits (115), Expect = 1e-06
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Frame = +2
Query: 95 RLIELPY----SEDGFRMVVVLPDKLDGLKSVLQKA-AERGLLEDVFRLQPTSAAVNLEL 259
++I+LPY +E F M + LPD DGL + QK +E LE L V + +
Sbjct: 227 KVIKLPYKQGKNERKFSMYIFLPDDHDGLFELTQKIFSEPMFLEQ--HLPTEKCHVGISV 284
Query: 260 PKFEVKSGLDLNNLLPEIGVSKIF-DEAARGIVV---DSS--LKVSKVFQEAFIKVDEEG 421
P F++ +D+ + L ++G+ F EA ++ DSS L +S V +A ++VD++G
Sbjct: 285 PNFKISFQIDVKDFLKDMGLELPFLREAEFSDMIKEDDSSGPLFLSDVLHKAVLEVDQKG 344
Query: 422 ATAGAFTGLIAVPKMEVLNPPPPLDFKVDRPFAYFI 529
+ + M + P P FK D PF + I
Sbjct: 345 IEETSVS-------MGLGKPLPAQHFKADHPFFFMI 373
>01_07_0288 +
42534552-42534558,42535302-42537280,42537367-42537513,
42537982-42538526,42538906-42538981,42539357-42539437
Length = 944
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 116 SEDGFRMVVVLPDKLDGLKSVLQKAAERGLLEDVFRLQPTSAAVN-LELPKFEVKSGLDL 292
+ DG ++P LD ++S+ KAA++G D T + L+L + GLDL
Sbjct: 532 NSDGRLTKAIIPSNLDMIRSLDSKAAKQGKKTDALSFLRTPQMNSLLQLRDIALSGGLDL 591
Query: 293 NNLLP 307
N +P
Sbjct: 592 NRPVP 596
>07_01_0353 +
2563807-2564496,2564595-2564660,2564853-2564918,
2565044-2565115,2565196-2565261,2565355-2565417,
2565505-2565570,2565963-2566062,2567403-2567504,
2567772-2567995,2568200-2568314,2568653-2568763,
2568873-2569088,2569426-2569624,2570690-2570790,
2570872-2570919,2571052-2571236,2571345-2571462,
2571572-2571699,2571981-2572107,2572529-2572647,
2572770-2572938,2573078-2573162,2573247-2573320,
2573449-2573568,2574068-2574251,2574343-2574464,
2574548-2574755,2574885-2574958,2575047-2575185,
2575275-2575456,2575852-2576007,2576153-2576284,
2576508-2576566,2576913-2576945,2577065-2577196,
2577303-2577479
Length = 1675
Score = 32.7 bits (71), Expect = 0.22
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Frame = -3
Query: 462 LGTAIRPVKAPAVAPSSSTLMNASWKTLDTFKELSTTIPRAASS-NIFETPISGNKLL-- 292
LGTA K VAPS+ M+ S T T + + R +S+ + + +G+ ++
Sbjct: 29 LGTASSIKKRTDVAPSAELGMSRSSLTKSTSSMNAAPVQRRSSTGSAGKQQDNGSSVVAK 88
Query: 291 RSNPLFTSNLGSSK-LTAALVGCNLNTSSRRPLSAAFCNTDF--KPSSLSGRTTTIRKPS 121
+++P + + SK +TA++V + + + + D KP+ S +T++K
Sbjct: 89 KASPSLSDGVKKSKPVTASMVSSKSSLEKKSSVQSERAKVDAMKKPAVKSSPISTLKKVP 148
Query: 120 SEYGNSINRAPSS 82
S NS + A SS
Sbjct: 149 SLTENSSSSASSS 161
>11_03_0128 - 10437407-10438049,10438097-10438272
Length = 272
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 128 FRMVVVLPDKLDGLKSVLQKAAER 199
+ MV+ LPD DGL+ +++K A R
Sbjct: 193 YAMVIFLPDVRDGLRGLVEKMASR 216
>03_05_0034 +
20064750-20065001,20065542-20065730,20066313-20066511,
20069479-20069885
Length = 348
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 137 VVVLPDKLDGLKSVLQKAAERGL-LEDVFRLQPTSAAVNLELP 262
V LPD DG++ ++ + A +GL L+D+ L A N P
Sbjct: 182 VTYLPDSFDGIRRLITRFASKGLSLKDLAVLSGAHALGNTHCP 224
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 27.9 bits (59), Expect = 6.3
Identities = 30/107 (28%), Positives = 52/107 (48%)
Frame = -3
Query: 438 KAPAVAPSSSTLMNASWKTLDTFKELSTTIPRAASSNIFETPISGNKLLRSNPLFTSNLG 259
K P+ P ++ L A+ K T + T++ +++S I TP S +L + S
Sbjct: 523 KIPST-PRTNPLSTATSKIPSTPR---TSLLSSSTSKIPSTP-STCELSTATGKIPSTTC 577
Query: 258 SSKLTAALVGCNLNTSSRRPLSAAFCNTDFKPSSLSGRTTTIRKPSS 118
+S L+ A G +T S PLS + T PS+ ++TI+ P++
Sbjct: 578 TSPLSTA-TGKTSSTPSTSPLSTSTSKTSSTPSTSPLSSSTIKIPTT 623
>03_02_0069 +
5401789-5401965,5403514-5403568,5403674-5405649,
5405710-5405868,5406081-5406252,5406617-5406915,
5407147-5407392
Length = 1027
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 233 TSAAVNLELPKFEVKSGLDLNNLLPEIGV 319
T + +E P F KS +LN L+P+I V
Sbjct: 701 TEGGIAIEGPDFRTKSAEELNELIPKIQV 729
>08_02_0600 -
19166283-19166851,19166988-19168839,19169347-19169415,
19171797-19171844,19173500-19173622
Length = 886
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 65 PYTENKELGARLIELPYSEDGFRMVVVLP 151
P+T KEL +L S D FR+ VVLP
Sbjct: 575 PHTIPKELSLKLASKIRSGDSFRVYVVLP 603
>02_01_0088 - 627825-628984,629339-629509,629612-630416
Length = 711
Score = 27.5 bits (58), Expect = 8.3
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -3
Query: 417 SSSTLMNASWKTLDTFKELSTTIPRAASSNIFETPISGNKLLRSNPLFTSNLGSSKLTAA 238
SSS + S + ++ST I S+N T G + P FT + ++KLT
Sbjct: 45 SSSNMEIYSLNLIGGQAQVSTFIADKCSNNTDGTSTDGWVSTSTAPFFTLSSRANKLT-- 102
Query: 237 LVGCN 223
+VGCN
Sbjct: 103 VVGCN 107
>01_06_0145 +
26964898-26965169,26965319-26965400,26966131-26966345,
26966912-26966975,26967336-26967440
Length = 245
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = -3
Query: 330 NIFETPISGNKLLRSNPLFTSNLGSSKLTAALVGCNLNTSSRRPL 196
+I ET SG+ ++ +P + NL S L A L+G +L +SS RP+
Sbjct: 155 SILETQYSGDTVVIVSP-DSDNL--SILQAGLIGLDLRSSSYRPM 196
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,166,641
Number of Sequences: 37544
Number of extensions: 309816
Number of successful extensions: 1014
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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