Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_C22
(257 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50199-3|AAA91263.1| 555|Caenorhabditis elegans Hypothetical pr... 46 4e-06
AM748820-1|CAO72174.1| 555|Caenorhabditis elegans hexosaminidas... 46 4e-06
AF022972-2|AAC48242.1| 346|Caenorhabditis elegans Seven tm rece... 27 1.8
Z29094-8|CAA82337.1| 254|Caenorhabditis elegans Hypothetical pr... 25 5.6
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 25 5.6
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 25 5.6
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 25 5.6
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 25 5.6
U64840-1|AAB04959.2| 484|Caenorhabditis elegans Glutamate-gated... 25 7.4
AJ243914-1|CAB51708.1| 484|Caenorhabditis elegans Glutamate-gat... 25 7.4
U97010-6|AAL65797.1| 501|Caenorhabditis elegans Hypothetical pr... 25 9.8
U97010-5|AAK73903.1| 444|Caenorhabditis elegans Hypothetical pr... 25 9.8
U97010-4|AAL65798.1| 438|Caenorhabditis elegans Hypothetical pr... 25 9.8
AF039720-5|AAB96696.1| 408|Caenorhabditis elegans Hypothetical ... 25 9.8
>U50199-3|AAA91263.1| 555|Caenorhabditis elegans Hypothetical
protein T14F9.3 protein.
Length = 555
Score = 46.0 bits (104), Expect = 4e-06
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Frame = +1
Query: 4 KSTPVVWQEVFDEGVPLSNDTLIQVWK--PHEK-YEML-HILSKGHKVVYSSAWYL 159
K P+ WQEVFD +P N +I +WK HE+ YE + +I S+ V+ S+ WYL
Sbjct: 374 KRKPIFWQEVFDNNIPDPN-AVIHIWKGNTHEEIYEQVKNITSQNFPVIVSACWYL 428
>AM748820-1|CAO72174.1| 555|Caenorhabditis elegans hexosaminidase
protein.
Length = 555
Score = 46.0 bits (104), Expect = 4e-06
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Frame = +1
Query: 4 KSTPVVWQEVFDEGVPLSNDTLIQVWK--PHEK-YEML-HILSKGHKVVYSSAWYL 159
K P+ WQEVFD +P N +I +WK HE+ YE + +I S+ V+ S+ WYL
Sbjct: 374 KRKPIFWQEVFDNNIPDPN-AVIHIWKGNTHEEIYEQVKNITSQNFPVIVSACWYL 428
>AF022972-2|AAC48242.1| 346|Caenorhabditis elegans Seven tm
receptor protein 112 protein.
Length = 346
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = -1
Query: 122 LLKMCSISYFSCGFQTWMRVSLERGTPSSNTSCH 21
++ M + F CGF TW + RG H
Sbjct: 211 VMSMTFVVVFYCGFSTWWTIREHRGASDRTRHLH 244
>Z29094-8|CAA82337.1| 254|Caenorhabditis elegans Hypothetical
protein C07A9.10 protein.
Length = 254
Score = 25.4 bits (53), Expect = 5.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 32 CSTRGCLSPTIPSSKF 79
CS +GC +PTIP +
Sbjct: 210 CSAQGCKNPTIPDKPY 225
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
F57F4.4 protein.
Length = 2090
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 17 LYGRKCSTRGCLSPTIPSSKFGNHMKNMRCY 109
L G CST CL PT+ + N +K CY
Sbjct: 1659 LSGCCCSTDACLDPTVSPPRTPNPLK---CY 1686
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 17 LYGRKCSTRGCLSPTIPSSKFGNHMKNMRCY 109
L G CST CL PT+ + N +K CY
Sbjct: 1659 LSGCCCSTDACLDPTVSPPRTPNPLK---CY 1686
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 183 TGLTSTCQIHGRWCASTAPPPTLTI 257
T L ST G +TAPPPT ++
Sbjct: 670 TTLPSTTTTQGTTTTTTAPPPTTSV 694
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 183 TGLTSTCQIHGRWCASTAPPPTLTI 257
T L ST G +TAPPPT ++
Sbjct: 767 TTLPSTTTTQGTTTTTTAPPPTTSV 791
>U64840-1|AAB04959.2| 484|Caenorhabditis elegans Glutamate-gated
chloride channelprotein 3 protein.
Length = 484
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -2
Query: 112 CVASHIFHVVSKL-G*GYRWREAPP 41
C AS ++ KL G GY WR PP
Sbjct: 22 CDASSDTEIIKKLLGKGYDWRVRPP 46
>AJ243914-1|CAB51708.1| 484|Caenorhabditis elegans Glutamate-gated
chloride channelsubunit protein.
Length = 484
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -2
Query: 112 CVASHIFHVVSKL-G*GYRWREAPP 41
C AS ++ KL G GY WR PP
Sbjct: 22 CDASSDTEIIKKLLGKGYDWRVRPP 46
>U97010-6|AAL65797.1| 501|Caenorhabditis elegans Hypothetical
protein W08A12.1a protein.
Length = 501
Score = 24.6 bits (51), Expect = 9.8
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +2
Query: 17 LYGRKCSTRGCLSPTIPSSKFGNHMKNMRCYTS*VKVT---KSSTHPLGTSDHLMSGGDW 187
+YG S +P GNH+ + YT+ VK T + S P T + ++G
Sbjct: 415 MYGNMYFNMDIYSDPLPPQANGNHLIFLETYTTVVKGTPLPEGSMPPFLTIEKEITGDSQ 474
Query: 188 TNFY 199
+ Y
Sbjct: 475 YSMY 478
>U97010-5|AAK73903.1| 444|Caenorhabditis elegans Hypothetical
protein W08A12.1b protein.
Length = 444
Score = 24.6 bits (51), Expect = 9.8
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +2
Query: 17 LYGRKCSTRGCLSPTIPSSKFGNHMKNMRCYTS*VKVT---KSSTHPLGTSDHLMSGGDW 187
+YG S +P GNH+ + YT+ VK T + S P T + ++G
Sbjct: 358 MYGNMYFNMDIYSDPLPPQANGNHLIFLETYTTVVKGTPLPEGSMPPFLTIEKEITGDSQ 417
Query: 188 TNFY 199
+ Y
Sbjct: 418 YSMY 421
>U97010-4|AAL65798.1| 438|Caenorhabditis elegans Hypothetical
protein W08A12.1c protein.
Length = 438
Score = 24.6 bits (51), Expect = 9.8
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +2
Query: 17 LYGRKCSTRGCLSPTIPSSKFGNHMKNMRCYTS*VKVT---KSSTHPLGTSDHLMSGGDW 187
+YG S +P GNH+ + YT+ VK T + S P T + ++G
Sbjct: 352 MYGNMYFNMDIYSDPLPPQANGNHLIFLETYTTVVKGTPLPEGSMPPFLTIEKEITGDSQ 411
Query: 188 TNFY 199
+ Y
Sbjct: 412 YSMY 415
>AF039720-5|AAB96696.1| 408|Caenorhabditis elegans Hypothetical
protein F33D11.2 protein.
Length = 408
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 82 KPHEKYEMLHILSKGHKVVYSSAWY 156
K E E+LH+ S+ K Y + W+
Sbjct: 25 KDFEMDEILHVSSQAKKFTYGAFWF 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,905,571
Number of Sequences: 27780
Number of extensions: 116368
Number of successful extensions: 330
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,740,198
effective HSP length: 64
effective length of database: 10,962,278
effective search space used: 230207838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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