Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_C19
         (664 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.4  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   6.0  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    22   6.0  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         22   6.0  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   7.9  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   7.9  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 261 NMFYKYNDPTNSTRVRLPPKHIP 193
           NM +  N P N+T + +P K  P
Sbjct: 214 NMTFAQNGPFNTTTIFVPVKPCP 236


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 306 TEKQCSLRRSP*RPGNMFYKYNDPTNSTRVR 214
           T K   +  +P   GN+ Y YN+P +    R
Sbjct: 305 TSKPLPMVDNPESTGNLVYIYNNPFSDVEER 335


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 304 GETVLAPPKSLASGEHVLQVQRPDK 230
           G+T    PKS+ SG+  + + +P K
Sbjct: 384 GKTTEENPKSIKSGDAAIVMLQPTK 408


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 304 GETVLAPPKSLASGEHVLQVQRPDK 230
           G+T    PKS+ SG+  + + +P K
Sbjct: 95  GKTTEENPKSIKSGDAAIVMLQPTK 119


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 198 CVSEEDEPGYCLSGRCTCK 254
           C+++  + G C +G C C+
Sbjct: 85  CLAQRRKGGSCRNGVCICR 103


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 531 LDRWWGKTMIT 563
           +DRW GKT +T
Sbjct: 70  VDRWNGKTFVT 80


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 198 CVSEEDEPGYCLSGRCTCKTCS 263
           C+S     G+C  G C C+  S
Sbjct: 64  CLSLGKAGGHCEKGVCICRKTS 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,738
Number of Sequences: 438
Number of extensions: 3018
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)