Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_C18
(491 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1374 - 29671511-29672252,29672452-29672558,29672904-29673245 32 0.22
10_08_0625 + 19362303-19363853 31 0.66
01_06_1346 - 36478844-36479266,36479369-36479728,36479820-364801... 31 0.66
06_01_0332 - 2398683-2399316,2399933-2399983,2400455-2400528,240... 29 1.5
05_04_0068 + 17635693-17637204 29 2.7
11_06_0436 + 23531000-23531524 28 3.5
06_02_0067 - 11087664-11087786,11087954-11088000,11088217-110883... 28 3.5
11_06_0434 - 23512921-23513529 28 4.7
10_08_0328 - 16805296-16806121,16806493-16807274 28 4.7
08_02_0497 - 17811413-17811529,17811644-17811724,17812693-178128... 28 4.7
06_01_0356 + 2557127-2557193,2557272-2557315,2557433-2557528,255... 28 4.7
02_04_0597 - 24198112-24198462,24199249-24199389,24200322-242005... 28 4.7
01_06_0092 - 26377011-26377613,26379581-26380168 28 4.7
07_03_0377 + 17442942-17443529,17443616-17444158 27 6.2
01_01_0984 + 7779251-7779329,7779354-7780054 27 6.2
10_01_0139 - 1660382-1660729,1660826-1661008,1662122-1663057,166... 27 8.2
08_02_1508 + 27602104-27602265,27602398-27602449,27603357-276047... 27 8.2
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 27 8.2
>06_03_1374 - 29671511-29672252,29672452-29672558,29672904-29673245
Length = 396
Score = 32.3 bits (70), Expect = 0.22
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +2
Query: 281 ESADENEISGLPDLSLYEHELSAALDYSGGWRPLASHLQLDNTAWYSAQPSAARTL 448
E+ DE+E SGL L L Y WR + SH+ W+ P L
Sbjct: 295 ENGDEDEASGLDQADLVIEYLKLCEQYPVPWRMVRSHVHKMLGDWFRVHPQVREEL 350
>10_08_0625 + 19362303-19363853
Length = 516
Score = 30.7 bits (66), Expect = 0.66
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 191 MKWYMTSAPSGQDVDFDLKDDIKSEPEDEYESADENEISGLPDL 322
++W M + L D+IKS+ D+ E ++ G+P L
Sbjct: 323 LQWIMAELVKNPSIQSKLHDEIKSKTGDDQPEVTEEDVHGMPYL 366
>01_06_1346 -
36478844-36479266,36479369-36479728,36479820-36480110,
36480193-36480267,36482292-36482446,36482549-36482665,
36482757-36482976
Length = 546
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 156 DQADSVSPSAFTESTIFSSNTSSEFRSPGDPLVLDAPPRELQLC 25
++ ++ S +AFT+S SS++S + P+ L APPR+ C
Sbjct: 6 EEREARSEAAFTDSADGSSSSSDAASADEWPVTLAAPPRKTAAC 49
>06_01_0332 -
2398683-2399316,2399933-2399983,2400455-2400528,
2400685-2400782,2400874-2400956,2401323-2401582
Length = 399
Score = 29.5 bits (63), Expect = 1.5
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +2
Query: 218 SGQDVDFDLKDDIKSEP-EDEYE---SADENEISGLPDLSLYEHELSAALDYSGGWRPL 382
SG D D D D+K P E EY ++DE + S+YE + S AL W L
Sbjct: 340 SGDDADADADSDVKEPPPESEYGEVFASDEAAAAAAYGCSMYELDDSFALIDDSVWNCL 398
>05_04_0068 + 17635693-17637204
Length = 503
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 344 SAALDYSGGWRPLASHLQLDNTAWYSAQPSAA 439
S A+D +GGW P +S ++++YS+ S++
Sbjct: 26 SLAVDSAGGWSPSSSSRSARSSSYYSSSKSSS 57
>11_06_0436 + 23531000-23531524
Length = 174
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 218 SGQDVDFDLKDDIKSEPEDEYESADENEIS 307
SGQ+ DFD+ D + + ++E E +DE +I+
Sbjct: 131 SGQE-DFDVDSDTEDDDDEEEEISDEEDIN 159
>06_02_0067 -
11087664-11087786,11087954-11088000,11088217-11088384,
11089278-11089491,11091102-11091275
Length = 241
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 333 STS*AQRWTTPAGGG-RSRHTCSSTTPRGTARSPARREPCSNIL 461
S + A+RW P+GG R +ST P AR R P +L
Sbjct: 13 SAAAARRWPAPSGGVLRFAPLATSTVPASIARGSLRGVPAGVVL 56
>11_06_0434 - 23512921-23513529
Length = 202
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 218 SGQDVDFDLKDDIKSEPEDEYESADENEIS 307
S +D +FD K+D +DE S DE E S
Sbjct: 153 SEEDDEFDEKEDDSDNEDDEESSDDEEETS 182
>10_08_0328 - 16805296-16806121,16806493-16807274
Length = 535
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 299 EISGLPDLSLYEHELSAALDYSGGWRPLASHLQLDN 406
++SGL +L LY + + + W P +H L N
Sbjct: 140 DLSGLVELRLYNNNFVGNIPHQLSWLPKITHFDLGN 175
>08_02_0497 -
17811413-17811529,17811644-17811724,17812693-17812815,
17812945-17813193
Length = 189
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 254 IKSEPEDEYESADENEISGLPDLSLYEHELS 346
+K + +DEYE A + ++ GLP L + + S
Sbjct: 136 VKVDTDDEYELARDMQVRGLPTLYFFSPDQS 166
>06_01_0356 +
2557127-2557193,2557272-2557315,2557433-2557528,
2559259-2559351,2559450-2559540,2559617-2559678,
2559754-2559938,2560022-2560199,2560293-2560336,
2560440-2560635,2560728-2560745,2560955-2561005
Length = 374
Score = 27.9 bits (59), Expect = 4.7
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 83 NSDEVLLEKMVDSVKAEGDTE-SAWSRARDKPEIRNIMKWYMTSAPSGQDVDFDLKDDIK 259
+ DE + E D ++ + + + + RDK I + + W+ A +D D D++DD +
Sbjct: 263 DDDEDIDEDTADELQGQMEHDYDIGTTIRDKI-IPHAVSWFTGEAVQAEDFD-DMEDDEE 320
Query: 260 SEPED----EYESADENE 301
+ +D E E DE+E
Sbjct: 321 DDEDDDEDEEEEEEDEDE 338
>02_04_0597 -
24198112-24198462,24199249-24199389,24200322-24200537,
24200626-24201561,24201655-24201816,24202026-24202304,
24202399-24203171,24206142-24207363
Length = 1359
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 239 DLKDDIKSEPEDEYESADENEISGLPDLSLYEHELSAA 352
D +DD+ ++P+D ES D ++SG + ++ + LS A
Sbjct: 427 DDQDDLSTDPDDFIESEDSEDMSG-DEEDMFRNLLSRA 463
>01_06_0092 - 26377011-26377613,26379581-26380168
Length = 396
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 89 DEVLLEKMVDSVKAEGDTESAWSRARDKPEIR 184
D L+ K VD++K E +WS RDK +R
Sbjct: 345 DVALVNKNVDALKEEYHVPPSWSVQRDKGMVR 376
>07_03_0377 + 17442942-17443529,17443616-17444158
Length = 376
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 239 DLKDDIKSEPEDEYESADENEISGLP 316
D+ DD++ P A E E+SGLP
Sbjct: 114 DVGDDVRRRPMPSAAPATEEEVSGLP 139
>01_01_0984 + 7779251-7779329,7779354-7780054
Length = 259
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 187 VSYLRLVPRSGPSRFRVTFSLHRINHFLK*YLVR 86
V +L + RS +R R+TFS H +N L+ + +R
Sbjct: 128 VKHLYIHLRSSSARDRITFSFHYLNPLLQSHTLR 161
>10_01_0139 -
1660382-1660729,1660826-1661008,1662122-1663057,
1667929-1668084,1669081-1669971
Length = 837
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 230 VDFDLKDDIKSEPEDEYESADENE 301
V F+L+D+ + E EDE E DE++
Sbjct: 795 VGFELEDEDEDEDEDEDEDEDEDD 818
>08_02_1508 + 27602104-27602265,27602398-27602449,27603357-27604757,
27604833-27606140,27606594-27607435
Length = 1254
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 363 PAGGGRSRHTCSSTTPRGTARSPARREPCSNILR 464
P R T S T+P G SP R+EP + R
Sbjct: 937 PTSSRRQEPTPSVTSPTGVPTSPRRQEPTPDTQR 970
>02_04_0179 + 20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 248 DDIKSEPEDEYESADENEISGLPDLSLYEHELS 346
D K++ E+E A+ + G+PD +L EH +S
Sbjct: 1005 DQKKAKEEEEKHMAEIKKNMGIPDSTLDEHRVS 1037
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,959,567
Number of Sequences: 37544
Number of extensions: 274406
Number of successful extensions: 1268
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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