Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_C18
(491 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB046843-1|BAB13449.2| 1236|Homo sapiens KIAA1623 protein protein. 31 2.2
AF106269-1|AAD50365.1| 483|Homo sapiens immunoglobulin-like tra... 30 3.8
U20657-1|AAB72237.1| 963|Homo sapiens ubiquitin protease protein. 29 6.6
BC125131-1|AAI25132.1| 963|Homo sapiens ubiquitin specific pept... 29 6.6
BC125130-1|AAI25131.1| 963|Homo sapiens ubiquitin specific pept... 29 6.6
AF017306-1|AAC27356.1| 916|Homo sapiens UnpES protein. 29 6.6
AF017305-1|AAC27355.1| 963|Homo sapiens UnpEL protein. 29 6.6
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 29 8.8
D86970-1|BAA13206.2| 2067|Homo sapiens KIAA0216 protein. 29 8.8
BC039612-1|AAH39612.1| 2002|Homo sapiens MYO18A protein protein. 29 8.8
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 29 8.8
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 29 8.8
AB177858-1|BAD66836.1| 2046|Homo sapiens KIAA0216 splice variant... 29 8.8
>AB046843-1|BAB13449.2| 1236|Homo sapiens KIAA1623 protein protein.
Length = 1236
Score = 31.1 bits (67), Expect = 2.2
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 215 PSGQDVDFDLKDDIKSEPEDEYESADENEISGLPDLSLYEHELSAALDYSGGWRP 379
P G++ D +DD + E E+E E +E E GL D L ++S A +G RP
Sbjct: 582 PGGKEED---EDDEEEEDEEEEEDEEEGEEGGLLDCGLRLKKVSFAERGAGRRRP 633
>AF106269-1|AAD50365.1| 483|Homo sapiens immunoglobulin-like
transcript 1c protein.
Length = 483
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -3
Query: 177 SGLSRALDQADSVSPSAFTESTIFSS-NTSSEFRSPGDPL 61
+GLS+A+ VSPS + +S+ N SSE+ +P DPL
Sbjct: 273 AGLSQAIFTLGPVSPSHGGQYRCYSAHNLSSEWSAPSDPL 312
>U20657-1|AAB72237.1| 963|Homo sapiens ubiquitin protease protein.
Length = 963
Score = 29.5 bits (63), Expect = 6.6
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -3
Query: 189 MFLISGLSRALDQADSVS-PSAFTESTIFSSNTSSEFRSPGDPLVLDAPPRELQLCSLSE 13
+F+ S ++D ++ V+ P F E S+TSS G PL+L P +L L SL +
Sbjct: 562 IFVYEVCSTSVDGSECVTLPVYFRERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQ 621
Query: 12 VM 7
+
Sbjct: 622 AV 623
>BC125131-1|AAI25132.1| 963|Homo sapiens ubiquitin specific
peptidase 4 (proto-oncogene) protein.
Length = 963
Score = 29.5 bits (63), Expect = 6.6
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -3
Query: 189 MFLISGLSRALDQADSVS-PSAFTESTIFSSNTSSEFRSPGDPLVLDAPPRELQLCSLSE 13
+F+ S ++D ++ V+ P F E S+TSS G PL+L P +L L SL +
Sbjct: 562 IFVYEVCSTSVDGSECVTLPVYFRERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQ 621
Query: 12 VM 7
+
Sbjct: 622 AV 623
>BC125130-1|AAI25131.1| 963|Homo sapiens ubiquitin specific
peptidase 4 (proto-oncogene) protein.
Length = 963
Score = 29.5 bits (63), Expect = 6.6
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -3
Query: 189 MFLISGLSRALDQADSVS-PSAFTESTIFSSNTSSEFRSPGDPLVLDAPPRELQLCSLSE 13
+F+ S ++D ++ V+ P F E S+TSS G PL+L P +L L SL +
Sbjct: 562 IFVYEVCSTSVDGSECVTLPVYFRERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQ 621
Query: 12 VM 7
+
Sbjct: 622 AV 623
>AF017306-1|AAC27356.1| 916|Homo sapiens UnpES protein.
Length = 916
Score = 29.5 bits (63), Expect = 6.6
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -3
Query: 189 MFLISGLSRALDQADSVS-PSAFTESTIFSSNTSSEFRSPGDPLVLDAPPRELQLCSLSE 13
+F+ S ++D ++ V+ P F E S+TSS G PL+L P +L L SL +
Sbjct: 515 IFVYEVCSTSVDGSECVTLPVYFRERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQ 574
Query: 12 VM 7
+
Sbjct: 575 AV 576
>AF017305-1|AAC27355.1| 963|Homo sapiens UnpEL protein.
Length = 963
Score = 29.5 bits (63), Expect = 6.6
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -3
Query: 189 MFLISGLSRALDQADSVS-PSAFTESTIFSSNTSSEFRSPGDPLVLDAPPRELQLCSLSE 13
+F+ S ++D ++ V+ P F E S+TSS G PL+L P +L L SL +
Sbjct: 562 IFVYEVCSTSVDGSECVTLPVYFRERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQ 621
Query: 12 VM 7
+
Sbjct: 622 AV 623
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 128 AEGDTESAWSRARDKPEIRNIMKWYMTSAPSGQDVDFDLKDDIKSEPEDEYESADENEIS 307
+E D E D+ EI +AP+ +D D + +D + + +DE + ++E +
Sbjct: 153 SEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAME 212
Query: 308 GLP 316
P
Sbjct: 213 TTP 215
>D86970-1|BAA13206.2| 2067|Homo sapiens KIAA0216 protein.
Length = 2067
Score = 29.1 bits (62), Expect = 8.8
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 80 RNSDEVLLEKMVDSVKAEGDTESAWSRARDKPEIRNIMKWYMTSAPSGQ-DVDFDLKDDI 256
R + E+ + + +A +TE W RD + + +K + P G+ V D I
Sbjct: 342 REPSDAKTEEQIAAEEAWNETEKVWLVHRDGFSLASQLKSEELNLPEGKVRVKLDHDGAI 401
Query: 257 KSEPEDEYESADENEISGLPDLS 325
ED+ E A+ L DL+
Sbjct: 402 LDVDEDDVEKANAPSCDRLEDLA 424
>BC039612-1|AAH39612.1| 2002|Homo sapiens MYO18A protein protein.
Length = 2002
Score = 29.1 bits (62), Expect = 8.8
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 80 RNSDEVLLEKMVDSVKAEGDTESAWSRARDKPEIRNIMKWYMTSAPSGQ-DVDFDLKDDI 256
R + E+ + + +A +TE W RD + + +K + P G+ V D I
Sbjct: 329 REPSDAKTEEQIAAEEAWNETEKVWLVHRDGFSLASQLKSEELNLPEGKVRVKLDHDGAI 388
Query: 257 KSEPEDEYESADENEISGLPDLS 325
ED+ E A+ L DL+
Sbjct: 389 LDVDEDDVEKANAPSCDRLEDLA 411
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 128 AEGDTESAWSRARDKPEIRNIMKWYMTSAPSGQDVDFDLKDDIKSEPEDEYESADENEIS 307
+E D E D+ EI +AP+ +D D + +D + + +DE + ++E +
Sbjct: 130 SEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAME 189
Query: 308 GLP 316
P
Sbjct: 190 TTP 192
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 128 AEGDTESAWSRARDKPEIRNIMKWYMTSAPSGQDVDFDLKDDIKSEPEDEYESADENEIS 307
+E D E D+ EI +AP+ +D D + +D + + +DE + ++E +
Sbjct: 153 SEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAME 212
Query: 308 GLP 316
P
Sbjct: 213 TTP 215
>AB177858-1|BAD66836.1| 2046|Homo sapiens KIAA0216 splice variant 1
protein.
Length = 2046
Score = 29.1 bits (62), Expect = 8.8
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 80 RNSDEVLLEKMVDSVKAEGDTESAWSRARDKPEIRNIMKWYMTSAPSGQ-DVDFDLKDDI 256
R + E+ + + +A +TE W RD + + +K + P G+ V D I
Sbjct: 321 REPSDAKTEEQIAAEEAWNETEKVWLVHRDGFSLASQLKSEELNLPEGKVRVKLDHDGAI 380
Query: 257 KSEPEDEYESADENEISGLPDLS 325
ED+ E A+ L DL+
Sbjct: 381 LDVDEDDVEKANAPSCDRLEDLA 403
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,587,997
Number of Sequences: 237096
Number of extensions: 1379359
Number of successful extensions: 5552
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5526
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -