Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_C09
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    61   5e-10
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    55   5e-08
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    43   2e-04
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    36   0.023
AF078157-9|AAG24075.3|  425|Caenorhabditis elegans Hypothetical ...    32   0.38 
Z68114-6|CAA92160.1|  316|Caenorhabditis elegans Hypothetical pr...    31   0.66 
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne...    31   0.66 
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AL032657-6|CAA21735.3|  139|Caenorhabditis elegans Hypothetical ...    30   1.5  
AF088290-1|AAC98297.1|  139|Caenorhabditis elegans caspase-relat...    30   1.5  
U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AF088289-1|AAC98296.1|  263|Caenorhabditis elegans caspase-relat...    29   2.0  
AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-relat...    29   2.0  
AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase prote...    29   2.0  
Z81047-7|CAB02834.1|  297|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z68005-4|CAA91992.2|  430|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AL117204-16|CAB55130.1|  389|Caenorhabditis elegans Hypothetical...    27   8.1  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 61.3 bits (142), Expect = 5e-10
 Identities = 59/199 (29%), Positives = 86/199 (43%), Gaps = 1/199 (0%)
 Frame = +1

Query: 7   YVLTAAHCVTGAILIEGTPKNVRLGEYNTTNNGPDCMKGTKDCAHPVVTAPIEKTIPHPD 186
           +VLTAAHC   A     T  +VR+G + + +  P          H V    I     HP 
Sbjct: 93  FVLTAAHCF--AKDRRPTSYSVRVGGHRSGSGSP----------HRVTAVSI-----HPW 135

Query: 187 YIPNDVQGRHDIALIRLMVTAPYTDFVRPICLPSLDYTQQPPADFEMYVAGWGMYKQFIS 366
           Y        +D A++R+      +   RPICLPSL   +         V GWG     I 
Sbjct: 136 YNIG-FPSSYDFAIMRIHPPVNTSTTARPICLPSLPAVENRLC----VVTGWG---STIE 187

Query: 367 GTGLSSTVKQHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGGKPGE-DACRGDSGG 543
           G+ LS+   + + +P +    C +    +      +     LCAG   G+ D+C+GDSGG
Sbjct: 188 GSSLSAPTLREIHVPLLSTLFCSSLPNYI----GRIHLPSMLCAGYSYGKIDSCQGDSGG 243

Query: 544 PLMYEVGNTFVMVGSVSYG 600
           PLM      + + G VS+G
Sbjct: 244 PLMCARDGHWELTGVVSWG 262


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 54.8 bits (126), Expect = 5e-08
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
 Frame = +1

Query: 214 HDIALIRLMVTA-PYTDFVRPICLPSLDYTQQPPADFEMYVAGWGMYKQFISGTGLSSTV 390
           HDIA++ +      + ++ +PICLPS D+   P    +  V+GWG         GL    
Sbjct: 116 HDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGR--QCVVSGWG-------SMGLRYAE 166

Query: 391 K-QHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGG-KPGEDACRGDSGGPL-MYEV 561
           + Q   +P ++R  C  + +         +++   CAG  + G D+C+GDSGGP      
Sbjct: 167 RLQAALIPIINRFDCVNSSQIYSS-----MSRSAFCAGYLEGGIDSCQGDSGGPFACRRE 221

Query: 562 GNTFVMVGSVSYG 600
              FV+ G +S+G
Sbjct: 222 DGAFVLAGVISWG 234


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 4/151 (2%)
 Frame = +1

Query: 160 IEKTIPHPDYIPNDVQGRHDIALIRLMVTAPYTDFVRPICLPSLDYTQQPPADFEMYVAG 339
           +++   H  Y  N+    +DIAL+R+         ++P+CL   D ++         V G
Sbjct: 107 VKEAYIHSGY--NNQTADNDIALLRISSDLSKLG-IKPVCLVH-DDSKLLKQYKNGVVIG 162

Query: 340 WGM-YKQFISGTG--LSSTVKQHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGGKP 510
           +G+   +  SG    ++S   Q   +P +  D C    R L    ++ IT  Q+CAG   
Sbjct: 163 YGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFL-SLLSVKITGYQICAGAYL 221

Query: 511 GEDACRGDSGGPLMYEVGN-TFVMVGSVSYG 600
              A  GDSGGPL+    N  +V +G  SYG
Sbjct: 222 HGTA-PGDSGGPLLIHKSNGEYVQIGITSYG 251


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 35.9 bits (79), Expect = 0.023
 Identities = 43/175 (24%), Positives = 67/175 (38%), Gaps = 4/175 (2%)
 Frame = +1

Query: 100 NGPDCMKGTKDCAHPVVTAPIEKTIPHPDYIPNDVQGRHDIALIRLMVTAPYTDFVRPIC 279
           N P C K   D  H  V A     +   ++  ++    HD A++ +     +++ VRPIC
Sbjct: 111 NDPRCKKS--DVIHNKVRA----VLVDGEFASSNCLKGHDWAIVEVEKRIHFSENVRPIC 164

Query: 280 L--PSLDYTQQPPADFEMYVAGWGMYKQFISGTGLSSTVKQHVKLPYVDRDRCQAAQRTL 453
           L  P++ YT+       + V GWG  + F     L   +        +DRD  +     L
Sbjct: 165 LPRPNMYYTK------SLAVPGWG--RIFNESGPLIHEIPMR-----IDRDCKRPWSDRL 211

Query: 454 RGGEALVITKEQLCAGGKPGEDACRGDSGGPLMYEVGN--TFVMVGSVSYGPKYC 612
                  I    +          C GDSGG L Y   N     ++   S+G + C
Sbjct: 212 PADADDFICATSMNVSNYSAPRTCHGDSGGGLEYRDDNYGRAFLIAITSFGTRGC 266


>AF078157-9|AAG24075.3|  425|Caenorhabditis elegans Hypothetical
           protein F25E5.4 protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 505 KPGEDACRGDSGGPLMYEVGNTFVMVGSVSYGPKYC 612
           K  +  C GD GG  +  + N F M+G  + G K C
Sbjct: 227 KQNQGLCSGDFGGSAVSRIDNRFTMLGFFAQGNKNC 262


>Z68114-6|CAA92160.1|  316|Caenorhabditis elegans Hypothetical
           protein F17A2.9 protein.
          Length = 316

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = -2

Query: 179 CGIVFSIGAVTTGCAQSLVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVTQCAAVSTYF 3
           C ++  I +V T C   L       P+ +  Y P R F  + S     ++Q + + TYF
Sbjct: 45  CNLICQIISVATLCLLQLRQVSNLSPMEIWCYGPIRHFSAITSYLFYVLSQISTLMTYF 103


>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
            neurexin-like protein 1 protein.
          Length = 1655

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = -2

Query: 587  DPTITKVLPTSYMRGPPESPLHASSPGLPPAHS 489
            DPT  K  P      PP SP+HAS P  PP  S
Sbjct: 1617 DPTAPKDSPLYSNIRPPTSPIHASVPVPPPRMS 1649


>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
           protein C25A8.4 protein.
          Length = 1067

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +1

Query: 94  TNNGPDCMKGTKDCAHPVV-TAPIEKTIPHPDYIPNDVQGRHDIALIR 234
           T   P+ ++    C H V  + PI++   +P Y  +DV+  +DI  IR
Sbjct: 38  TRLSPNLLQNITTCTHLVYGSIPIDRDTGYPQYSVSDVESGYDIDNIR 85


>AL032657-6|CAA21735.3|  139|Caenorhabditis elegans Hypothetical
           protein Y47H9C.6 protein.
          Length = 139

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 328 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 233
           +F   PG +++  +T + W +Q LY V++ +A
Sbjct: 56  SFSTSPGFLSFKDETKDTWYIQELYRVIIENA 87


>AF088290-1|AAC98297.1|  139|Caenorhabditis elegans caspase-related
           protein 3 protein.
          Length = 139

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 328 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 233
           +F   PG +++  +T + W +Q LY V++ +A
Sbjct: 56  SFSTSPGFLSFKDETKDTWYIQELYRVIIENA 87


>U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical
           protein F13H8.5 protein.
          Length = 513

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = -2

Query: 614 PQYFGP*LTDPTITKVLPTSYMRGPPESPLHASS---PGLPPAHSCSLVITSASPP 456
           PQYF P        +  P  Y +  P+ PL       P  PP +S ++VI  A PP
Sbjct: 85  PQYFQP------QQQQQPVQYQQQQPQQPLQYQQQPQPAPPPIYSQTVVIPQAPPP 134


>AF088289-1|AAC98296.1|  263|Caenorhabditis elegans caspase-related
           protein 2B protein.
          Length = 263

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 328 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 233
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 185 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 216


>AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-related
           protein 2A protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 328 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 233
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 748 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 779


>AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase protein
           2 protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 328 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 233
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 748 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 779


>Z81047-7|CAB02834.1|  297|Caenorhabditis elegans Hypothetical
           protein C41G6.9 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 273 GPYKICIRCCYHQPNKRNVMSALHIVGDVIWMWNSFF 163
           G Y I ++   H    RN M  LH VG  + ++ SFF
Sbjct: 40  GAYLIIVKTPSHMKCARNSMLCLHCVGAFVDLFFSFF 76


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 520 ACRGDSGGPLMYEVGNTFVMVGSVSY 597
           AC GDSG P+   V    ++VG+V++
Sbjct: 209 ACMGDSGSPVYCFVNGKRILVGTVAH 234


>Z68005-4|CAA91992.2|  430|Caenorhabditis elegans Hypothetical
           protein F59F3.2 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 493 CAGGKPGEDACRGDSGGP 546
           C  G PGED  RG++G P
Sbjct: 157 CPQGPPGEDGLRGEAGEP 174


>AL117204-16|CAB55130.1|  389|Caenorhabditis elegans Hypothetical
           protein Y116A8C.25 protein.
          Length = 389

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 90  YNKQWSGLHERYQRLCTSRCYCSYRKNYSTSRLHPQ 197
           Y K+   L + Y  +  + CY + RKNY T R+ P+
Sbjct: 294 YRKKEKKLDKIYNNVYNN-CYNNVRKNYCTKRITPK 328


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,015,101
Number of Sequences: 27780
Number of extensions: 428119
Number of successful extensions: 1496
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)