Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_C03
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    24   1.6  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    24   1.6  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    24   1.6  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              23   3.6  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   6.4  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   6.4  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   6.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   6.4  
AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.        22   6.4  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 300 LVHLILHPHRPPDRLNQ 350
           +VH + HP+R PD +NQ
Sbjct: 20  VVH-VYHPYRQPDGMNQ 35


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 300 LVHLILHPHRPPDRLNQ 350
           +VH + HP+R PD +NQ
Sbjct: 20  VVH-VYHPYRQPDGMNQ 35


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 627 PHKLISIQEISPELKVNT 680
           PH++  +QE+S  LK NT
Sbjct: 274 PHRIPQLQEVSEFLKKNT 291


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -3

Query: 609 CGKLVTTVEYCCXRITDASNMVCISQSNXSRASMLRR 499
           CG +  TV+YC     +   +  ++     R SM +R
Sbjct: 81  CGDIAHTVKYCPKGTKNPGTLATVNAFKLLRNSMGKR 117


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 6   ITMWYYHVAPYVI*TPCTLMRLRQSSPLLT 95
           I++W+    PY++     +  L + SPL T
Sbjct: 284 ISLWFMAWTPYLVINFSGIFNLVKISPLFT 313


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 465 RLPNYNVWKVTSDVTLRHDYXYSVRYR 545
           RLP   VWK    +    D  Y VRY+
Sbjct: 102 RLPPDKVWKPDIVLFNNADGNYEVRYK 128


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 470 QSRGARGLRDAAEVEGGHPK 411
           Q+   R LRD AE  GG P+
Sbjct: 226 QALALRWLRDNAEAFGGDPE 245


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 470 QSRGARGLRDAAEVEGGHPK 411
           Q+   R LRD AE  GG P+
Sbjct: 226 QALALRWLRDNAEAFGGDPE 245


>AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.
          Length = 76

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 6   ITMWYYHVAPYVI*TPCTLMRLRQSSPLLT 95
           I++W+    PY++     +  L + SPL T
Sbjct: 34  ISLWFMAWTPYLVINFSGIFNLVKISPLFT 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,117
Number of Sequences: 438
Number of extensions: 2819
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)