Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_C01
         (592 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13070-15|AAC46646.1|  366|Caenorhabditis elegans Hypothetical p...    99   2e-21
D83739-1|BAA12092.1|  366|Caenorhabditis elegans aldolase Ce2 pr...    99   2e-21
Z81115-1|CAB03291.1|  365|Caenorhabditis elegans Hypothetical pr...    96   2e-20
D83738-1|BAA12091.1|  366|Caenorhabditis elegans aldolase Ce1 pr...    96   2e-20
AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical...    30   1.1  
AF039038-5|AAK29711.1|  604|Caenorhabditis elegans Cell division...    28   5.7  
Z81536-4|CAB04364.1|  310|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z49907-8|CAN99663.1|  499|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z49907-7|CAA90088.1|  497|Caenorhabditis elegans Hypothetical pr...    27   10.0 
AF273807-1|AAG15156.1|  416|Caenorhabditis elegans nuclear recep...    27   10.0 
AF016685-16|AAG24152.2|  328|Caenorhabditis elegans Serpentine r...    27   10.0 
AF016675-1|AAF02172.2|  416|Caenorhabditis elegans Nuclear hormo...    27   10.0 
AF016424-2|AAB65332.1|  720|Caenorhabditis elegans Peroxisome as...    27   10.0 
AB012224-1|BAA76440.1|  720|Caenorhabditis elegans Pex6p homolog...    27   10.0 
AB010968-1|BAA33544.1|  720|Caenorhabditis elegans PEX6 protein.       27   10.0 

>U13070-15|AAC46646.1|  366|Caenorhabditis elegans Hypothetical
           protein F01F1.12a protein.
          Length = 366

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 48/82 (58%), Positives = 61/82 (74%)
 Frame = +1

Query: 4   NLNAINSVDLKRPWVLTFSYGRALQASVLRAWAGNEDNVPVGQQELIKRAKANGLAATGK 183
           NLNAINSV L +PW LTFSYGRALQASVL+AW G ++N+   Q+ L+ R+KANG A+ GK
Sbjct: 286 NLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGK 345

Query: 184 YVAGSIPSLASFKSNFVKSHAY 249
           Y AG   + A+ +S FV  H+Y
Sbjct: 346 Y-AGEDAAGAAAESLFVAKHSY 366


>D83739-1|BAA12092.1|  366|Caenorhabditis elegans aldolase Ce2
           protein.
          Length = 366

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 48/82 (58%), Positives = 61/82 (74%)
 Frame = +1

Query: 4   NLNAINSVDLKRPWVLTFSYGRALQASVLRAWAGNEDNVPVGQQELIKRAKANGLAATGK 183
           NLNAINSV L +PW LTFSYGRALQASVL+AW G ++N+   Q+ L+ R+KANG A+ GK
Sbjct: 286 NLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGK 345

Query: 184 YVAGSIPSLASFKSNFVKSHAY 249
           Y AG   + A+ +S FV  H+Y
Sbjct: 346 Y-AGEDAAGAAAESLFVAKHSY 366


>Z81115-1|CAB03291.1|  365|Caenorhabditis elegans Hypothetical
           protein T05D4.1 protein.
          Length = 365

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 43/83 (51%), Positives = 57/83 (68%)
 Frame = +1

Query: 1   VNLNAINSVDLKRPWVLTFSYGRALQASVLRAWAGNEDNVPVGQQELIKRAKANGLAATG 180
           +NLNAIN V  K+PW LTFSYGRALQAS L  WAG ++N+   Q+ L+ RA+ N LA+ G
Sbjct: 283 LNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVG 342

Query: 181 KYVAGSIPSLASFKSNFVKSHAY 249
           KY   +    A+ +S FV +H+Y
Sbjct: 343 KYTGDASADAAASQSLFVANHSY 365


>D83738-1|BAA12091.1|  366|Caenorhabditis elegans aldolase Ce1
           protein.
          Length = 366

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 43/83 (51%), Positives = 57/83 (68%)
 Frame = +1

Query: 1   VNLNAINSVDLKRPWVLTFSYGRALQASVLRAWAGNEDNVPVGQQELIKRAKANGLAATG 180
           +NLNAIN V  K+PW LTFSYGRALQAS L  WAG ++N+   Q+ L+ RA+ N LA+ G
Sbjct: 284 LNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVG 343

Query: 181 KYVAGSIPSLASFKSNFVKSHAY 249
           KY   +    A+ +S FV +H+Y
Sbjct: 344 KYTGDASADAAASQSLFVANHSY 366


>AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.19 protein.
          Length = 643

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -2

Query: 171 CETVRLGTLDEFLLSNGNIILIAGPSTEHGSLESAAVAERQYPGSL 34
           C     G    FL+   N IL  GP   H S+ S+   ++QYP +L
Sbjct: 209 CAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSAL 254


>AF039038-5|AAK29711.1|  604|Caenorhabditis elegans Cell division
           cycle related protein25.1 protein.
          Length = 604

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +2

Query: 98  GPAMRIMFPLDSRNSSSVPRRTVSQPPANTSPDLSRRWLLSNLTLLNR 241
           G  M+ +F LDS + S   +R +S+ P +     +   +  ++TLL+R
Sbjct: 109 GRKMKTVFDLDSLDHSEYEKRVMSERPTDNHRKRTSSSMSPSVTLLDR 156


>Z81536-4|CAB04364.1|  310|Caenorhabditis elegans Hypothetical
           protein F40D4.5 protein.
          Length = 310

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +2

Query: 173 PPANTSPDLSRRWLLSNLTLLNRTPIK*NTFFLFQSFDFETEFNNKKKKT 322
           PP    PD+ R W +SN+ + N       T FLF        F  KK+K+
Sbjct: 156 PPIGLHPDVGRFWSMSNV-IFNTI-----TLFLFVFLMIVFHFKGKKQKS 199


>Z49907-8|CAN99663.1|  499|Caenorhabditis elegans Hypothetical
           protein B0491.6b protein.
          Length = 499

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 263 FFLFQSFDFETEFNNKKKK 319
           FFL Q  D +T+FNN  KK
Sbjct: 149 FFLLQGSDADTQFNNLHKK 167


>Z49907-7|CAA90088.1|  497|Caenorhabditis elegans Hypothetical
           protein B0491.6a protein.
          Length = 497

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 263 FFLFQSFDFETEFNNKKKK 319
           FFL Q  D +T+FNN  KK
Sbjct: 147 FFLLQGSDADTQFNNLHKK 165


>AF273807-1|AAG15156.1|  416|Caenorhabditis elegans nuclear receptor
           NHR-59 protein.
          Length = 416

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +2

Query: 269 LFQSFDFETEFNNKKKKT 322
           L  S DFE   NNKKKKT
Sbjct: 167 LSSSLDFEISANNKKKKT 184


>AF016685-16|AAG24152.2|  328|Caenorhabditis elegans Serpentine
           receptor, class x protein1 protein.
          Length = 328

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
 Frame = +3

Query: 366 VIRTLLFFELKFIFDIHCFV*CCYFK--NSFIINYIF---SFMYPRTST*LPLRNIRYVT 530
           ++R+ +F +   I    CF     F    S+I+ Y+F   SF+  +T        I  +T
Sbjct: 117 ILRSSMFTKRNLII---CFSFTLVFAVAKSYIVQYVFPCCSFLVDQTVLSYSYFQIENIT 173

Query: 531 SVTNNFDILLKALS 572
           + T++ DI L ALS
Sbjct: 174 NYTDHSDIPLNALS 187


>AF016675-1|AAF02172.2|  416|Caenorhabditis elegans Nuclear hormone
           receptor familyprotein 59 protein.
          Length = 416

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +2

Query: 269 LFQSFDFETEFNNKKKKT 322
           L  S DFE   NNKKKKT
Sbjct: 167 LSSSLDFEISANNKKKKT 184


>AF016424-2|AAB65332.1|  720|Caenorhabditis elegans Peroxisome
           assembly factor protein6 protein.
          Length = 720

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -1

Query: 433 QHHTKQCMSKINFNSKNNNVRITSSDQFIN*KFHI 329
           +HH KQ +   N   KN+ +RIT+ + + +   H+
Sbjct: 159 KHHLKQILKSANVFYKNDVIRITNYNAYTDKTTHL 193


>AB012224-1|BAA76440.1|  720|Caenorhabditis elegans Pex6p homolog
           protein.
          Length = 720

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -1

Query: 433 QHHTKQCMSKINFNSKNNNVRITSSDQFIN*KFHI 329
           +HH KQ +   N   KN+ +RIT+ + + +   H+
Sbjct: 159 KHHLKQILKSANVFYKNDVIRITNYNAYTDKTTHL 193


>AB010968-1|BAA33544.1|  720|Caenorhabditis elegans PEX6 protein.
          Length = 720

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -1

Query: 433 QHHTKQCMSKINFNSKNNNVRITSSDQFIN*KFHI 329
           +HH KQ +   N   KN+ +RIT+ + + +   H+
Sbjct: 159 KHHLKQILKSANVFYKNDVIRITNYNAYTDKTTHL 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,592,359
Number of Sequences: 27780
Number of extensions: 206886
Number of successful extensions: 494
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)