Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_B21
         (546 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U97552-5|AAQ01520.1|  605|Caenorhabditis elegans Hypothetical pr...    27   6.7  
U97552-4|AAX55684.1|  666|Caenorhabditis elegans Hypothetical pr...    27   6.7  
U97552-3|AAQ01521.1|  663|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
           protein E01G6.1 protein.
          Length = 1391

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
 Frame = +1

Query: 151 CEPLLNLFRNKSRTAEDKKLLGDSQC--GYENNIPMVCCPIS-NACKTPDDKPGICVGLY 321
           C+ L+ L   K+  +E ++   +  C  GYE N    CCP S NAC     +   C G  
Sbjct: 424 CDGLVPL---KNPNSELQRCSEEDPCPAGYECNDSSYCCPSSENACNANMSRGNGCKG-- 478

Query: 322 NCEHITYMMLDKTRKSKMDYVRQSVCNGPETFS 420
                +    DK++K    +V       P  F+
Sbjct: 479 -STQRSMWFYDKSKKKCSQFVYNGCGGTPNRFT 510


>U97552-5|AAQ01520.1|  605|Caenorhabditis elegans Hypothetical
           protein W05H7.4a protein.
          Length = 605

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 430 GPPPEINPEDMTLNGKMSRAVTAFPLRKQQR 522
           G PP + P+D+ L  K ++     PL   QR
Sbjct: 218 GRPPRVRPQDLLLQVKPNQGFHTLPLYHSQR 248


>U97552-4|AAX55684.1|  666|Caenorhabditis elegans Hypothetical
           protein W05H7.4e protein.
          Length = 666

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 430 GPPPEINPEDMTLNGKMSRAVTAFPLRKQQR 522
           G PP + P+D+ L  K ++     PL   QR
Sbjct: 279 GRPPRVRPQDLLLQVKPNQGFHTLPLYHSQR 309


>U97552-3|AAQ01521.1|  663|Caenorhabditis elegans Hypothetical
           protein W05H7.4b protein.
          Length = 663

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 430 GPPPEINPEDMTLNGKMSRAVTAFPLRKQQR 522
           G PP + P+D+ L  K ++     PL   QR
Sbjct: 276 GRPPRVRPQDLLLQVKPNQGFHTLPLYHSQR 306


>Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical
           protein C01G10.1 protein.
          Length = 1204

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 125 DSFLGVVQVCARIKFTDINRIYETVEKIIILL 30
           D F  ++ V  ++  T++NR+ E  EK+ +LL
Sbjct: 59  DQFNNIIDVDIKVARTELNRMGEEFEKLSLLL 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,412,959
Number of Sequences: 27780
Number of extensions: 255429
Number of successful extensions: 668
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)