Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_B19
(480 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 24 0.97
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 23 1.7
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 3.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 3.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 3.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 3.9
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 3.9
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 3.9
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 3.9
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 5.2
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 9.1
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 9.1
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 23.8 bits (49), Expect = 0.97
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 281 ISNACKTPDDKP 316
++NACK DDKP
Sbjct: 392 LTNACKKKDDKP 403
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 23.0 bits (47), Expect = 1.7
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 317 PVYRLESYKRLKW 279
P YRLE KRL W
Sbjct: 333 PKYRLELQKRLPW 345
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 3.9
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 406 IRLYRSGTVQRMLR 447
+R+YR+GTV ++R
Sbjct: 166 LRIYRNGTVNYLMR 179
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 3.9
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 406 IRLYRSGTVQRMLR 447
+R+YR+GTV ++R
Sbjct: 166 LRIYRNGTVNYLMR 179
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 3.9
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 406 IRLYRSGTVQRMLR 447
+R+YR+GTV ++R
Sbjct: 217 LRIYRNGTVNYLMR 230
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 3.9
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 406 IRLYRSGTVQRMLR 447
+R+YR+GTV ++R
Sbjct: 166 LRIYRNGTVNYLMR 179
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 3.9
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 263 VYYSHNHIVSLLKVSYPQLFCFY 195
++Y+ N IV + +SY + FY
Sbjct: 236 LFYTVNLIVPCVSISYLSVLAFY 258
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.8 bits (44), Expect = 3.9
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -2
Query: 260 YYSHNHIVSLLKVSYPQLFCF 198
YYS+ +++L+ S P C+
Sbjct: 640 YYSYIGVLTLVATSMPTYICY 660
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 3.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 344 EHITYMMLDKTRKSTMDYVRQSVCTGP 424
E T MLDKTR T D + GP
Sbjct: 1439 EDETSCMLDKTRAQTFDGKDYPLRLGP 1465
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 5.2
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 369 IRPERVPWITFDNPF 413
I PER +I F PF
Sbjct: 525 INPERAEFIEFSKPF 539
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 20.6 bits (41), Expect = 9.1
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = -3
Query: 361 HISNMLTVVQTDT 323
H+S+++ V++TDT
Sbjct: 13 HMSDVIEVIETDT 25
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 20.6 bits (41), Expect = 9.1
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = -3
Query: 361 HISNMLTVVQTDT 323
H+S+++ V++TDT
Sbjct: 13 HMSDVIEVIETDT 25
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,977
Number of Sequences: 438
Number of extensions: 3116
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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