Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_B18
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 101 4e-22
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 65 3e-11
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 44 5e-05
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 44 5e-05
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 44 5e-05
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 42 2e-04
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 41 4e-04
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 41 6e-04
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 40 8e-04
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 40 8e-04
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 40 0.001
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 40 0.001
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 40 0.001
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 39 0.002
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 38 0.003
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 38 0.003
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 38 0.003
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 38 0.004
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 38 0.004
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 38 0.004
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 36 0.017
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 36 0.017
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 36 0.017
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 36 0.017
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 36 0.017
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 36 0.017
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 36 0.017
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 36 0.017
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 36 0.022
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 36 0.022
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 35 0.029
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 35 0.029
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 35 0.039
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.052
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 34 0.052
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 32 0.21
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 32 0.21
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 32 0.21
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 32 0.21
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 31 0.63
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 27 5.9
AC024847-7|AAF60856.2| 261|Caenorhabditis elegans Hypothetical ... 27 5.9
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 101 bits (241), Expect = 4e-22
Identities = 48/81 (59%), Positives = 64/81 (79%)
Frame = +2
Query: 266 LLVRAKLAPERSLAFLIPAMDLIYNLKFKPGNGTGVIILSPTRELSMQTFGVLMELMKYH 445
+L AK ++LAFL+PA++L++ L +K NGTGVII+SPTRELSMQT+GVL EL++
Sbjct: 108 VLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGS 167
Query: 446 HHTYGLVMGGANRSTEAQKLS 508
+ TYGLVMGG+NRS E KL+
Sbjct: 168 NLTYGLVMGGSNRSAEKDKLA 188
Score = 66.1 bits (154), Expect = 1e-11
Identities = 31/56 (55%), Positives = 42/56 (75%)
Frame = +1
Query: 130 LSDQKFSSLEDKVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
L+ F+SLE KV L ++ +GFTTMTEIQAK+I PLLEG+D++ + +TGSGK
Sbjct: 63 LTKTTFASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGK 118
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 64.9 bits (151), Expect = 3e-11
Identities = 28/77 (36%), Positives = 50/77 (64%)
Frame = +2
Query: 278 AKLAPERSLAFLIPAMDLIYNLKFKPGNGTGVIILSPTRELSMQTFGVLMELMKYHHHTY 457
AK ++LA +IP ++ ++ K+ P G G +I+SPTREL++QTF + + +H +
Sbjct: 120 AKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSC 179
Query: 458 GLVMGGANRSTEAQKLS 508
GLV+GG++ + E ++S
Sbjct: 180 GLVIGGSDVAFERNRIS 196
Score = 44.4 bits (100), Expect = 5e-05
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 133 SDQKFSSLED-KVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
S + F ED + TL G+KD +T TEIQ I L G D+VGA +TGSGK
Sbjct: 71 SSRTFLRFEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGK 126
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/70 (34%), Positives = 39/70 (55%)
Frame = +2
Query: 266 LLVRAKLAPERSLAFLIPAMDLIYNLKFKPGNGTGVIILSPTRELSMQTFGVLMELMKYH 445
++V + ++LAF++P M +I N K +P + G +ILSP+REL Q V+ +
Sbjct: 49 VVVESPTGSGKTLAFVLPMMRMIQNAKLQPAD-IGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 446 HHTYGLVMGG 475
+ T V GG
Sbjct: 108 NLTVETVTGG 117
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +1
Query: 130 LSDQKFSSLEDKVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
++ +KFS L VC ++ M T T +QA IP +LEG D++G +TG+GK
Sbjct: 86 MTTKKFSQLG--VCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGK 139
Score = 31.5 bits (68), Expect = 0.36
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +2
Query: 278 AKLAPERSLAFLIPAMDLIYNLKFKPGNGTGVIILSPTRELSMQTFGVLMELMKYHHHTY 457
A+ ++LAF IP ++ L P G +IL+PTREL+ Q L K
Sbjct: 133 ARTGTGKTLAFAIP---ILQKLSVDP-YGIYALILTPTRELAFQIAEQFTALGKPITLKC 188
Query: 458 GLVMGGANRSTEAQKLS 508
+++GG + +A++LS
Sbjct: 189 SVIVGGRSLIHQARELS 205
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +1
Query: 130 LSDQKFSSLEDKVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
++ +KFS L VC ++ M T T +QA IP +LEG D++G +TG+GK
Sbjct: 86 MTTKKFSQLG--VCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGK 139
Score = 31.5 bits (68), Expect = 0.36
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +2
Query: 278 AKLAPERSLAFLIPAMDLIYNLKFKPGNGTGVIILSPTRELSMQTFGVLMELMKYHHHTY 457
A+ ++LAF IP ++ L P G +IL+PTREL+ Q L K
Sbjct: 133 ARTGTGKTLAFAIP---ILQKLSVDP-YGIYALILTPTRELAFQIAEQFTALGKPITLKC 188
Query: 458 GLVMGGANRSTEAQKLS 508
+++GG + +A++LS
Sbjct: 189 SVIVGGRSLIHQARELS 205
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +1
Query: 190 IKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
+K ++ T IQA+AIP ++ GRD++G +TGSGK
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGK 354
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 278 AKLAPERSLAFLIPAMDLIYNL-KFKPGNGTGVIILSPTRELSMQTF 415
AK ++LAFL+P I + + + G+G +IL+PTREL+MQT+
Sbjct: 348 AKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTY 394
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 41.1 bits (92), Expect = 4e-04
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +1
Query: 190 IKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
+K++G+ T IQ +AIP L+ RD++G +TGSGK
Sbjct: 316 VKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGK 351
Score = 28.3 bits (60), Expect = 3.4
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 278 AKLAPERSLAFLIPAMDLIYNL-KFKPGN----GTGVIILSPTRELSMQTFGVLMELMKY 442
A+ ++ AFL+P + I +L K + G II++PTREL+ Q + K
Sbjct: 345 AETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKL 404
Query: 443 HHHTYGLVMGGANRSTEAQKL 505
V+GGA+R + KL
Sbjct: 405 LGIKTVSVIGGASREDQGMKL 425
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1
Query: 193 KDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
K G T T IQ + IP L GRD++G TGSGK
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGK 240
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 40.3 bits (90), Expect = 8e-04
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 136 DQKFSSLED-KVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
DQ S +D ++ E L GI GF + IQ +AI P G+D++ Q+G+GK
Sbjct: 25 DQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGK 79
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 40.3 bits (90), Expect = 8e-04
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 136 DQKFSSLED-KVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
DQ S +D ++ E L GI GF + IQ +AI P G+D++ Q+G+GK
Sbjct: 25 DQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGK 79
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +2
Query: 278 AKLAPERSLAFLIPAMDLIYNLKFKP-GNGTGVIILSPTRELSMQTFGVLMELMKYHHHT 454
AK ++LAF++PA+ I + G G V++L PTREL+ Q V ++ H+
Sbjct: 173 AKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFC----HS 228
Query: 455 YGLVM----GGANRSTEAQKL 505
GL M GGA++ +A+ L
Sbjct: 229 LGLKMTCLFGGASKGPQARDL 249
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 205 FTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
F T IQ+ + P + GRD++ +TGSGK
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGK 179
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/60 (35%), Positives = 37/60 (61%)
Frame = +2
Query: 296 RSLAFLIPAMDLIYNLKFKPGNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 475
++ AF+IP ++ LK + G +++SPTREL++QTF V+ EL ++ ++GG
Sbjct: 74 KTAAFVIP---MLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 190 IKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
I+ GF T IQ K IP +++G+D+V +TGSGK
Sbjct: 39 IEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGK 74
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/60 (35%), Positives = 37/60 (61%)
Frame = +2
Query: 296 RSLAFLIPAMDLIYNLKFKPGNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 475
++ AF+IP ++ LK + G +++SPTREL++QTF V+ EL ++ ++GG
Sbjct: 74 KTAAFVIP---MLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 190 IKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
I+ GF T IQ K IP +++G+D+V +TGSGK
Sbjct: 39 IEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGK 74
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +1
Query: 181 LMGIKDMGFTTMTEIQAKAIPPLLEGR-DLVGAGQTGSGK 297
L I+ MGF+ TEIQ+ +P + R D++GA +TGSGK
Sbjct: 167 LEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGK 206
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 172 EPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
E L GI GF + IQ +AIP +L+ RD++ Q+G+GK
Sbjct: 35 EDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGK 76
Score = 33.5 bits (73), Expect = 0.090
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 365 TGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGGANRSTEAQKL 505
T +ILSPTREL++Q V++ L Y + +GG N + +KL
Sbjct: 95 TQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKL 141
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 172 EPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
E L GI GF + IQ +A+P +L+ RD++ Q+G+GK
Sbjct: 35 EDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGK 76
Score = 33.5 bits (73), Expect = 0.090
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 365 TGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGGANRSTEAQKL 505
T +ILSPTREL++Q V++ L Y + +GG N + +KL
Sbjct: 95 TQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKL 141
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +1
Query: 166 VCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
V +P + +G+ ++IQ A+P L+G+D++G +TGSGK
Sbjct: 51 VSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGK 94
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +1
Query: 190 IKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
I+ + T IQA AIP L GRD++G +TGSGK
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGK 315
Score = 34.7 bits (76), Expect = 0.039
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 278 AKLAPERSLAFLIPAMDLIYNLK-FKPGNGTGVIILSPTRELSMQTFGVLMELMKYHHHT 454
AK ++ A+L PA+ I + K G G +I+ PTREL++Q F + K ++
Sbjct: 309 AKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNIN 368
Query: 455 YGLVMGGANRSTEAQKL 505
GG ++ ++ +L
Sbjct: 369 PICAYGGGSKWEQSNEL 385
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 178 TLMG-IKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
++MG I+ GF + IQ++ P LL G+D +G QTGSGK
Sbjct: 94 SIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGK 134
Score = 30.7 bits (66), Expect = 0.63
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 VIILSPTRELSMQTFGVLMELMKYHHHTYGLV--MGGANRSTEAQ 499
V++LSPTREL+ Q G E+ KY ++ Y V GG +R + +
Sbjct: 166 VLVLSPTRELAQQIEG---EVKKYSYNGYKSVCLYGGGSRPEQVE 207
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 190 IKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
IK G+ T +Q +IP L GRDL+ QTGSGK
Sbjct: 181 IKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGK 216
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 374 IILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG-ANRSTEAQKL 505
++LSPTRELS+Q F + T L+ GG N + KL
Sbjct: 254 LVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKL 298
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 175 PTLM-GIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
P +M + G++ T +Q +IP LL RDL+ QTGSGK
Sbjct: 148 PAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGK 189
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 175 PTLM-GIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
P +M + G++ T +Q +IP LL RDL+ QTGSGK
Sbjct: 132 PAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGK 173
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 175 PTLM-GIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
P +M + G++ T +Q +IP LL RDL+ QTGSGK
Sbjct: 129 PAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGK 170
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 35.9 bits (79), Expect = 0.017
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 97 QLPGSSLCLGILSDQKFSSLEDKVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGA 276
+L S +GI + F+ E + E + G++ T IQ A+P + +G D++
Sbjct: 327 KLTSSEKTVGIKPCKTFA--EANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMAC 384
Query: 277 GQTGSGK 297
QTGSGK
Sbjct: 385 AQTGSGK 391
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 121 LGILSDQKFSSLEDKVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
+G+ + + FS E + E + G+T T IQ +P + +G D++ QTGSGK
Sbjct: 546 VGVKTCKTFS--EANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 121 LGILSDQKFSSLEDKVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
+G+ + + FS E + E + G+T T IQ +P + +G D++ QTGSGK
Sbjct: 546 VGVKTCKTFS--EANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 35.9 bits (79), Expect = 0.017
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 97 QLPGSSLCLGILSDQKFSSLEDKVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGA 276
+L S +GI + F+ E + E + G++ T IQ A+P + +G D++
Sbjct: 327 KLTSSEKTVGIKPCKTFA--EANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMAC 384
Query: 277 GQTGSGK 297
QTGSGK
Sbjct: 385 AQTGSGK 391
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 35.9 bits (79), Expect = 0.017
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 190 IKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
++ G+T T IQ +P + +G+D++ QTGSGK
Sbjct: 313 VERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGK 348
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 35.9 bits (79), Expect = 0.017
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 190 IKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
++ G+T T IQ +P + +G+D++ QTGSGK
Sbjct: 313 VERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGK 348
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 35.9 bits (79), Expect = 0.017
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 97 QLPGSSLCLGILSDQKFSSLEDKVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGA 276
+L S +GI + F+ E + E + G++ T IQ A+P + +G D++
Sbjct: 327 KLTSSEKTVGIKPCKTFA--EANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMAC 384
Query: 277 GQTGSGK 297
QTGSGK
Sbjct: 385 AQTGSGK 391
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 121 LGILSDQKFSSLEDKVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
+G+ + + FS E + E + G+T T IQ +P + +G D++ QTGSGK
Sbjct: 546 VGVKTCKTFS--EANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 35.5 bits (78), Expect = 0.022
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 136 DQKFSSLEDKVCEPTLMG-IKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGKKP--G 306
D + +S + PT++ +K + + + IQ IP +L+G D++G +T +GK G
Sbjct: 377 DVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFG 436
Query: 307 LP 312
LP
Sbjct: 437 LP 438
Score = 28.3 bits (60), Expect = 3.4
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = +2
Query: 266 LLVRAKLAPERSLAFLIPAMDLIYNL------KFKPGNGTGVIILSPTRELSMQTFGVLM 427
+L +A+ + ++ AF +P +D I + K + +G +IL+PTREL+ Q +
Sbjct: 421 VLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQ---IHE 477
Query: 428 ELMKYHHHTYGLVMGGANRSTEAQKLS 508
L Y +T +V+ +S A+ L+
Sbjct: 478 ALRTYCQNTDIIVLLSYGQSDRARSLN 504
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 35.5 bits (78), Expect = 0.022
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 190 IKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
+ + +T T +Q++AIP +L G D + A +TGSGK
Sbjct: 17 LSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGK 52
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 35.1 bits (77), Expect = 0.029
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 106 GSSLCLGILSDQKFSSLEDKVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQT 285
GSS+ + S+ F SL + + TL +K+ F + +QA+AIP L GRD++ ++
Sbjct: 13 GSSI--DVQSNCTFESL--MIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKS 68
Query: 286 GSGK 297
G+GK
Sbjct: 69 GTGK 72
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 35.1 bits (77), Expect = 0.029
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 106 GSSLCLGILSDQKFSSLEDKVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQT 285
GSS+ + S+ F SL + + TL +K+ F + +QA+AIP L GRD++ ++
Sbjct: 13 GSSI--DVQSNCTFESL--MIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKS 68
Query: 286 GSGK 297
G+GK
Sbjct: 69 GTGK 72
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 34.7 bits (76), Expect = 0.039
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 266 LLVRAKLAPERSLAFLIPAMDLIYNLKFKPG-NGTGVIILSPTRELSMQTFGVLMELMKY 442
+L RAK ++ A+ IP ++ K +P +++ PTREL++QT + +EL K+
Sbjct: 83 ILARAKNGTGKTGAYCIPVIE-----KIQPALKAIQAMVIVPTRELALQTSQICVELSKH 137
Query: 443 HHHTYGLVMGGANRSTEAQKLS 508
+ GG + + +L+
Sbjct: 138 IQLKVMVTTGGTDLRDDIMRLN 159
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 181 LMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
LMGI + G+ + IQ +I L G+D++ + G+GK
Sbjct: 55 LMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGK 93
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.052
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Frame = +2
Query: 266 LLVRAKLAPERSLAFLIPAMDLIYNLK----FKPGNGTGV--IILSPTRELSMQTFGVLM 427
+L A ++LAF +P +D I LK + N + + ++L PTREL+ QT+
Sbjct: 166 VLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQTY---T 222
Query: 428 ELMKYHHHT 454
E +KY +T
Sbjct: 223 EFLKYCANT 231
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 160 DKVCEPTLMG-IKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
D P+L+ + + + IQ ++IP + E R+++ + TGSGK
Sbjct: 130 DSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGK 176
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 34.3 bits (75), Expect = 0.052
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 172 EPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
E L GI GF + IQ A+ P G+D+ Q GSGK
Sbjct: 5 EELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGK 46
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 32.3 bits (70), Expect = 0.21
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 205 FTTMTEIQAKAIPPLLEGR-DLVGAGQTGSGK 297
F+ TEIQ+ +P + R D++GA +TGSGK
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGK 39
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 32.3 bits (70), Expect = 0.21
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = +2
Query: 296 RSLAFLIPAMDLIYNLKFKPGNGTG------VIILSPTRELSMQTFGVLMELMKYHHHTY 457
++LAFLIP + + K + T ++I++PTREL QTF +L
Sbjct: 786 KTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKC 845
Query: 458 GLVMGGANRSTEAQKL 505
GL GG +R+ Q L
Sbjct: 846 GLAFGGYSRNANVQHL 861
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 190 IKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
+K M T IQ + P++ G D+V TGSGK
Sbjct: 751 LKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGK 786
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 32.3 bits (70), Expect = 0.21
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = +2
Query: 296 RSLAFLIPAMDLIYNLKFKPGNGTG------VIILSPTRELSMQTFGVLMELMKYHHHTY 457
++LAFLIP + + K + T ++I++PTREL QTF +L
Sbjct: 786 KTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKC 845
Query: 458 GLVMGGANRSTEAQKL 505
GL GG +R+ Q L
Sbjct: 846 GLAFGGYSRNANVQHL 861
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 190 IKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
+K M T IQ + P++ G D+V TGSGK
Sbjct: 751 LKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGK 786
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 172 EPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
E L I ++G+ ++Q I LE ++++G +TGSGK
Sbjct: 98 ERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGK 139
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 30.7 bits (66), Expect = 0.63
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 202 GFTTMTEIQAKAIPPLLEGRDLVGAGQTGSGK 297
G++ T IQ IP L G+D+ TG+GK
Sbjct: 167 GYSDPTPIQQACIPVALTGKDICACAATGTGK 198
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 329 LIYNLKFKPGNGTGVIILSPTRELSMQTFGV 421
LI N+K + G G+G+ ++PT + +Q V
Sbjct: 463 LIKNVKIQNGAGSGIDFMTPTGNIELQNIEV 493
>AC024847-7|AAF60856.2| 261|Caenorhabditis elegans Hypothetical
protein Y65B4BR.2 protein.
Length = 261
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 192 KRYGIHNNDRNTSKSYTSVVG 254
K+YG+ NND T++ Y S+VG
Sbjct: 137 KQYGVINNDVVTNEGYGSMVG 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,573,925
Number of Sequences: 27780
Number of extensions: 217628
Number of successful extensions: 600
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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