Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_B14
(520 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64842-8|AAB37085.1| 173|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z82070-6|CAB04910.1| 321|Caenorhabditis elegans Hypothetical pr... 30 0.86
Z93393-15|CAE54926.1| 347|Caenorhabditis elegans Hypothetical p... 29 1.5
Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z83216-7|CAB05676.2| 320|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z92832-6|CAB07375.2| 572|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 27 6.1
AF040654-7|AAK21450.2| 362|Caenorhabditis elegans Hypothetical ... 27 6.1
Z35598-4|CAA84653.1| 488|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF022972-12|AAC48232.1| 363|Caenorhabditis elegans Seven tm rec... 27 8.0
>U64842-8|AAB37085.1| 173|Caenorhabditis elegans Hypothetical
protein F25B4.9 protein.
Length = 173
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/108 (23%), Positives = 44/108 (40%)
Frame = +3
Query: 51 SDYEYFEEAGGWFKLHEIPLKWQTARLRCDYEGAMLASPTNFKLNSVIQQLADRYKTAVY 230
S++ YF + +KL + L W A +C ++GA S + + N + +L+ R+ + ++
Sbjct: 26 SNWRYFPQTNSCYKLIDENLPWTIAEFKCLFQGAHHVSIDSPEENQFVHELS-RW-SEIW 83
Query: 231 TGIHATVSDGDFNSLDNVPLFEIPIKWMPGXXXXXXXXXXCIVYHGEG 374
TG D + + D W G CI G G
Sbjct: 84 TGAAFFGKDQHYVNSDGSRYGNFE-NWKDGRKPPMNRARRCIKMDGNG 130
>Z82070-6|CAB04910.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.6 protein.
Length = 321
Score = 30.3 bits (65), Expect = 0.86
Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Frame = +3
Query: 63 YFEEAGGWFKLHEIPLKWQTARLRCDYEGAMLASPTNFKLNSVIQQ-LADRYKTAVYTGI 239
Y E+ ++ P ++ A +C+ G LAS N + N+++Q A+ +K + Y+
Sbjct: 26 YNEQFNRCYQYFTAPAQFSFAEQQCNLLGGHLASVQNGQENALLQSNAANSFKRSNYSDY 85
Query: 240 HATVSD----GDFNSLDNVPLFEIPIKWMPGXXXXXXXXXXCIVYHGEGLVEDVNCNEPY 407
+D G + D F+ W G I G+G + C
Sbjct: 86 WIGATDLETSGTWKWTDPSVTFDYS-NWQLGEPQSGSDCA--IQDKGDGTWSAIGCTSYR 142
Query: 408 PYIC 419
PY+C
Sbjct: 143 PYVC 146
>Z93393-15|CAE54926.1| 347|Caenorhabditis elegans Hypothetical
protein Y48E1B.16 protein.
Length = 347
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 72 EAGGWFKLHEIPLKWQTARLRCDYEGAMLASPTNFKLNSVIQQLADRYK-TAVYTGIHAT 248
E+G +K+ E + W A+L C+ G+ LA + N+ L D + V+ G+
Sbjct: 235 ESGTKYKIFEERMNWNDAQLHCEELGSHLAYLDSESKNTYATSLIDSQNISMVWFGLRTE 294
Query: 249 VSDG 260
V G
Sbjct: 295 VGLG 298
>Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.8 protein.
Length = 321
Score = 29.5 bits (63), Expect = 1.5
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Frame = +3
Query: 105 PLKWQTARLRCDYEGAMLASPTNFKLNSVIQQ-LADRYKTAVYT----GIHATVSDGDFN 269
P +++ A +C+ G LAS N + N+++Q A+ +K + Y+ G + + G +
Sbjct: 40 PAQFEFAEEQCNLLGGHLASVQNGQENALLQSNAANSFKRSNYSDYWIGANDLETSGTWK 99
Query: 270 SLDNVPLFEIPIKWMPGXXXXXXXXXXCIVYHGEGLVEDVNCNEPYPYIC 419
D F+ W G I G+G + C PY+C
Sbjct: 100 WTDPSVTFDYS-NWQLGEPQSGSDCA--IQDKGDGTWSAIGCTSYRPYVC 146
>Z83216-7|CAB05676.2| 320|Caenorhabditis elegans Hypothetical
protein C08F11.9 protein.
Length = 320
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = -3
Query: 428 VSVTNVWIWLIAVDVLY*AFAVIYDAVFIVIVIIRVTGHPFYWYLKQR 285
++VT + + ++VL +I+ +F++IVI +T PFY Y+ ++
Sbjct: 1 MNVTETFEYSENLNVLKNGLLLIFLVIFLIIVICFLTIFPFYVYVNKK 48
>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 237 YPCTPRSCTDRPIVVLQSLI*SLWETLTSHLH 142
Y C SC D V +S +L +T+T+H H
Sbjct: 974 YTCLSESCVDSRFAVRKSACQTLLQTVTAHGH 1005
>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 237 YPCTPRSCTDRPIVVLQSLI*SLWETLTSHLH 142
Y C SC D V +S +L +T+T+H H
Sbjct: 974 YTCLSESCVDSRFAVRKSACQTLLQTVTAHGH 1005
>Z92832-6|CAB07375.2| 572|Caenorhabditis elegans Hypothetical
protein F31D4.7 protein.
Length = 572
Score = 27.5 bits (58), Expect = 6.1
Identities = 9/42 (21%), Positives = 24/42 (57%)
Frame = -3
Query: 407 IWLIAVDVLY*AFAVIYDAVFIVIVIIRVTGHPFYWYLKQRY 282
+WL+ ++ Y + + + + IV +I ++G +W +++ Y
Sbjct: 127 LWLVILNQAYHKYGLKHAVLIIVFLIYCISGGLVFWLIEEPY 168
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 87 FKLHEIPLKWQTARLRCDYEGAMLASPTNFKLNSVIQQLADRYKTAVYTG 236
FK +E P+ ++ ARL C +G LAS N + ++ + V+TG
Sbjct: 567 FKRYEKPMNFEDARLFCVGKGGHLASIHNERQLLLLSGAPNINDCTVFTG 616
>AF040654-7|AAK21450.2| 362|Caenorhabditis elegans Hypothetical
protein R06B10.3 protein.
Length = 362
Score = 27.5 bits (58), Expect = 6.1
Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 4/116 (3%)
Frame = +3
Query: 87 FKLHEIPLKWQTARLRC-DYEGAMLASPTNFKLNSVIQQLADR---YKTAVYTGIHATVS 254
+ +H + A C DY G LAS + N+ + L+ + + G+ +
Sbjct: 39 YVVHTGAASFHDAEKACYDYGGYHLASVPSMIDNNFLYNLSSNSNVWANYFWIGLTDMTA 98
Query: 255 DGDFNSLDNVPLFEIPIKWMPGXXXXXXXXXXCIVYHGEGLVEDVNCNEPYPYICY 422
DG + +D + L + + W + + +C +PYP+ CY
Sbjct: 99 DGSWEWIDGLDL--VFMNWASSSTAGYCGAMRA----ADARWQAQDCTKPYPFFCY 148
>Z35598-4|CAA84653.1| 488|Caenorhabditis elegans Hypothetical
protein F10F2.6 protein.
Length = 488
Score = 27.1 bits (57), Expect = 8.0
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 360 YHGEGLVEDVNCNEPYPYIC 419
Y+G+ + D+ C + YP+ C
Sbjct: 458 YNGDKKINDIPCTDRYPFFC 477
>AF022972-12|AAC48232.1| 363|Caenorhabditis elegans Seven tm
receptor protein 204 protein.
Length = 363
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -3
Query: 491 LVHFILFISGSTFCHY*ILCVVSVTNVWIWLIAVDVLY*AFAVIYDAVFIVIVIIRVTGH 312
L++ I+ S S Y L + I+ I +DV+ FA Y + F+VIV ++ T
Sbjct: 27 LIYLIIKYSSSEIGAYKYLMIYISVFELIYAI-IDVIVSPFAHAYGSTFLVIVNLKKTSI 85
Query: 311 P 309
P
Sbjct: 86 P 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,596,961
Number of Sequences: 27780
Number of extensions: 267347
Number of successful extensions: 730
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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