Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_B09
         (376 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   2.8  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   5.0  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   5.0  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 171 TFHGLTESFSVRQPGQMVQPG*TVRG 94
           TFH   ++ SV   G +V PG T+ G
Sbjct: 638 TFHPRIKTRSVTLDGDVVDPGGTLSG 663


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 269 KDLISELKSELGGNLENVIIALMTPLSHFYAKELHD 376
           ++LI ELKSE G +    I    T L       +HD
Sbjct: 716 RNLIRELKSEYGNSKIYPIFPRYTMLKDMIKDIMHD 751


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 269 KDLISELKSELGGNLENVIIALMTPLSHFYAKELHD 376
           ++LI ELKSE G +    I    T L       +HD
Sbjct: 716 RNLIRELKSEYGNSKIYPIFPRYTMLKDMIKDIMHD 751


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 394,939
Number of Sequences: 2352
Number of extensions: 7493
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28804305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)