Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_B08
         (559 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            27   0.42 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            27   0.42 
U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    24   3.9  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    24   3.9  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   6.8  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   6.8  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   9.0  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   9.0  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 27.1 bits (57), Expect = 0.42
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +3

Query: 366 WHKFDTPFMKSSWE-PSTWFSLSRT 437
           W  +D+P +  SW+  STW  L+ T
Sbjct: 168 WQLYDSPTLPESWKFNSTWLGLATT 192


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 27.1 bits (57), Expect = 0.42
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +3

Query: 366 WHKFDTPFMKSSWE-PSTWFSLSRT 437
           W  +D+P +  SW+  STW  L+ T
Sbjct: 168 WQLYDSPTLPESWKFNSTWLGLATT 192


>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 419 PSAGFPRGLHEGRIELVPAGSEVKRRGWSL 330
           PS+ + R +   R   VPAGSEV   GW +
Sbjct: 147 PSSAYIRPIAL-RTSSVPAGSEVVISGWGV 175


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 271 AALADAPILSLNIYSRPPPT 212
           A LA   IL +  Y+ PPPT
Sbjct: 14  AWLASVTILGVEAYATPPPT 33


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 178 CPPFPIYHQPTLLVVVSNICSRTRSVHQRAP 270
           C  F +     L VVV N   RT  +H+  P
Sbjct: 300 CIMFMVASSVVLTVVVLNYHHRTADIHEMPP 330


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 178 CPPFPIYHQPTLLVVVSNICSRTRSVHQRAP 270
           C  F +     L VVV N   RT  +H+  P
Sbjct: 300 CIMFMVASSVVLTVVVLNYHHRTADIHEMPP 330


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 363 GWHKFDTPFMKSSWEPSTWFSLS 431
           GW KF     K +W P+++ +L+
Sbjct: 87  GWMKFSWNDPKLTWNPASYGNLN 109


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 206 QHCWWWSRIYVQGQDRCISERR 271
           +  +WW+    Q +  CI  RR
Sbjct: 269 RRAYWWTTEIAQCRSHCIEARR 290


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,438
Number of Sequences: 2352
Number of extensions: 12383
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)