Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_B06
         (666 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              35   6e-04
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.0  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   6.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.0  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 35.1 bits (77), Expect = 6e-04
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +1

Query: 124 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK 234
           C R  RPVC S+GK Y N C L+  R   HS   + K
Sbjct: 110 CPRRHRPVCASNGKIYANHCELH--RAACHSGSSLTK 144



 Score = 27.9 bits (59), Expect = 0.092
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = +1

Query: 385 CQEVKVADIQPCICTREI----KQVCGSDGVTYGNPCLLN-CATQSNPSLS 522
           C+    + I  C+C R+     + VC S+G  Y N C L+  A  S  SL+
Sbjct: 93  CELSPNSTIAVCVCMRKCPRRHRPVCASNGKIYANHCELHRAACHSGSSLT 143



 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 268 CTFIYAPVCGTDGNTYPNKCSL 333
           C   + PVC ++G  Y N C L
Sbjct: 110 CPRRHRPVCASNGKIYANHCEL 131



 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 407 SATLTSWQLPRRFIFRDGAYGR 342
           S  LT W  P R I + G +G+
Sbjct: 836 SPNLTKWGNPNRPIVQSGIFGK 857


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -3

Query: 310 CSRLCHRPGHI*RY-RRKDRLPHTY 239
           C RLC+R G + R+    + +P  Y
Sbjct: 247 CERLCNRLGRVKRFINWHEPIPEAY 271


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = -3

Query: 565 PQPSLCCRKDPGVRCSSSGSTVWRNSTGTGC 473
           P PS  CR         SGS +W+      C
Sbjct: 47  PIPSYACRGRCSSYLQVSGSKIWQMERSCMC 77


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 250 PHTYPLSRFSNRCASCPSRNTR 185
           P  YPL RF N     P R+ R
Sbjct: 67  PSVYPLLRFENPETHHPIRHGR 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,415
Number of Sequences: 438
Number of extensions: 4483
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)