Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_B04
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024762-3|AAO91689.2| 133|Caenorhabditis elegans Vacuolar h at... 52 3e-07
AC024762-2|AAF59474.3| 384|Caenorhabditis elegans Vacuolar h at... 52 3e-07
AB009567-1|BAA75067.1| 384|Caenorhabditis elegans Vha11 protein... 52 3e-07
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81575-7|CAB04638.1| 367|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z68119-6|CAE17916.1| 181|Caenorhabditis elegans Hypothetical pr... 28 3.5
>AC024762-3|AAO91689.2| 133|Caenorhabditis elegans Vacuolar h
atpase protein 11, isoformb protein.
Length = 133
Score = 51.6 bits (118), Expect = 3e-07
Identities = 33/76 (43%), Positives = 39/76 (51%)
Frame = +3
Query: 63 EYWVISAPVRPELCSRLGEPLNNGHKSGQPPVSNY*FPNTCI*RWGNWDQLVGLSDDLGK 242
EYW+IS P + + LN S Y P+ + G DQLVGLSDDL K
Sbjct: 8 EYWLISVPGEKG-ANDAWDKLNRS-TGNTSTNSKYLIPDLKV---GTLDQLVGLSDDLSK 62
Query: 243 LDTFVEGVTRKVAQYF 290
LDT E V RK+ QYF
Sbjct: 63 LDTSAEAVIRKLVQYF 78
>AC024762-2|AAF59474.3| 384|Caenorhabditis elegans Vacuolar h
atpase protein 11, isoforma protein.
Length = 384
Score = 51.6 bits (118), Expect = 3e-07
Identities = 33/76 (43%), Positives = 39/76 (51%)
Frame = +3
Query: 63 EYWVISAPVRPELCSRLGEPLNNGHKSGQPPVSNY*FPNTCI*RWGNWDQLVGLSDDLGK 242
EYW+IS P + + LN S Y P+ + G DQLVGLSDDL K
Sbjct: 8 EYWLISVPGEKG-ANDAWDKLNRS-TGNTSTNSKYLIPDLKV---GTLDQLVGLSDDLSK 62
Query: 243 LDTFVEGVTRKVAQYF 290
LDT E V RK+ QYF
Sbjct: 63 LDTSAEAVIRKLVQYF 78
Score = 33.9 bits (74), Expect = 0.071
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +2
Query: 299 VLEDQRDKLHENLMAE*QCTTNLLGHVSSGTWPSIH*TDLRNIRIL*QTVG----QIDAD 466
VLE+ + K+ ENL+ ++ +V+ W +++++L + +G QID D
Sbjct: 81 VLEEDKSKIAENLVIG---NKDMKTYVTKFQWEGAKYPLKQSLKVLSEIIGKQISQIDND 137
Query: 467 LKVKSAAYKALK 502
LKVKS Y LK
Sbjct: 138 LKVKSLTYNNLK 149
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 373 TRFQWDLAKYPLNRS 417
T+FQW+ AKYPL +S
Sbjct: 105 TKFQWEGAKYPLKQS 119
>AB009567-1|BAA75067.1| 384|Caenorhabditis elegans Vha11 protein
protein.
Length = 384
Score = 51.6 bits (118), Expect = 3e-07
Identities = 33/76 (43%), Positives = 39/76 (51%)
Frame = +3
Query: 63 EYWVISAPVRPELCSRLGEPLNNGHKSGQPPVSNY*FPNTCI*RWGNWDQLVGLSDDLGK 242
EYW+IS P + + LN S Y P+ + G DQLVGLSDDL K
Sbjct: 8 EYWLISVPGEKG-ANDAWDKLNRS-TGNTSTNSKYLIPDLKV---GTLDQLVGLSDDLSK 62
Query: 243 LDTFVEGVTRKVAQYF 290
LDT E V RK+ QYF
Sbjct: 63 LDTSAEAVIRKLVQYF 78
Score = 33.9 bits (74), Expect = 0.071
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +2
Query: 299 VLEDQRDKLHENLMAE*QCTTNLLGHVSSGTWPSIH*TDLRNIRIL*QTVG----QIDAD 466
VLE+ + K+ ENL+ ++ +V+ W +++++L + +G QID D
Sbjct: 81 VLEEDKSKIAENLVIG---NKDMKTYVTKFQWEGAKYPLKQSLKVLSEIIGKQISQIDND 137
Query: 467 LKVKSAAYKALK 502
LKVKS Y LK
Sbjct: 138 LKVKSLTYNNLK 149
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 373 TRFQWDLAKYPLNRS 417
T+FQW+ AKYPL +S
Sbjct: 105 TKFQWEGAKYPLKQS 119
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 332 FRAVYHVGLLIPSPEILSDFPSDTFNKGVQLAKVIRQPHQLIPVPPP-LNTGIGELIVRH 156
F + Y + +P + L+DF NK +A ++R + I +PP NT +G + +
Sbjct: 1817 FLSAYKTKIKMPIAKTLTDFRLSDINKFWLIAPLVRMCPKPINIPPQYANTTVGTVAAKF 1876
Query: 155 WR 150
R
Sbjct: 1877 LR 1878
>Z81575-7|CAB04638.1| 367|Caenorhabditis elegans Hypothetical
protein R08H2.8 protein.
Length = 367
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 198 GNWDQLVGLSDDLGKLDTFVEGVTR 272
G +D + GL GKL+ F+ GVT+
Sbjct: 162 GQYDYITGLEGSSGKLNVFMGGVTK 186
>Z68119-6|CAE17916.1| 181|Caenorhabditis elegans Hypothetical
protein T18D3.9 protein.
Length = 181
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 44 SSCENVGILGDKRTCATRTVQQTWGTLKQ-WPQIWATS 154
S C N IL + R ++ +++W LK+ W I+ATS
Sbjct: 94 SPCFNAAILFNLRLLQHQSAEKSWDLLKEDWFNIYATS 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,595,401
Number of Sequences: 27780
Number of extensions: 324494
Number of successful extensions: 718
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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