Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_B04
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    25   0.62 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   1.9  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   2.5  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    21   7.7  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    21   7.7  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 429 GYYSKQWDRSMPT*RLNQQRTKLSRPFTKF 518
           G +   WD  MP    ++  T+LSR  TK+
Sbjct: 176 GAFGWSWDEVMPYYLKSENNTELSRVGTKY 205


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 161 RHWRLPRFVAIV*GFP 114
           RHW+ P  V ++  FP
Sbjct: 863 RHWKFPNLVEVLDEFP 878



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 359 TNLLGHVSSGTWPSIH*TDLRNIRIL 436
           TNL G  SSGT   +   D+ ++ IL
Sbjct: 725 TNLSGDSSSGTTLLLELDDIASMEIL 750


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 516 IW*MALRALYAADLTFKSASICPTVC 439
           IW   +    + D+TF    I PT C
Sbjct: 124 IWVPDISVYNSGDMTFDQTGIPPTTC 149


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = -3

Query: 348 YSAIKFSCSLSRWSSNTLTRNIERLS**HLQQRCPACQGHQT 223
           Y   +  C+L     + + R ++ L+   L+  CP C   +T
Sbjct: 47  YLRRQLKCALGEAPCDPVGRRLKSLAPLVLRGACPQCSPEET 88


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = -3

Query: 348 YSAIKFSCSLSRWSSNTLTRNIERLS**HLQQRCPACQGHQT 223
           Y   +  C+L     + + R ++ L+   L+  CP C   +T
Sbjct: 47  YLRRQLKCALGEAPCDPVGRRLKSLAPLVLRGACPQCSPEET 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,558
Number of Sequences: 438
Number of extensions: 4349
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)