Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_A20
         (500 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.      28   3.3  
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein...    28   3.3  
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein...    28   3.3  
Z54342-11|CAA91146.1|  502|Caenorhabditis elegans Hypothetical p...    27   7.6  

>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +3

Query: 333 VTRSRANINS*HWWNITTNN*EMRGRIAFQHQITTPCVVSDHKPYKNQGRLF 488
           V R   N NS HWW +   + E    IA ++ + +P V  D   Y   G  F
Sbjct: 473 VERPEENENSNHWWGMRQTDMEFLAVIAREY-LASPAVSIDAGYYFGNGGKF 523


>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +3

Query: 333 VTRSRANINS*HWWNITTNN*EMRGRIAFQHQITTPCVVSDHKPYKNQGRLF 488
           V R   N NS HWW +   + E    IA ++ + +P V  D   Y   G  F
Sbjct: 473 VERPEENENSNHWWGMRQTDMEFLAVIAREY-LASPAVSIDAGYYFGNGGKF 523


>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
          Length = 1440

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +3

Query: 333 VTRSRANINS*HWWNITTNN*EMRGRIAFQHQITTPCVVSDHKPYKNQGRLF 488
           V R   N NS HWW +   + E    IA ++ + +P V  D   Y   G  F
Sbjct: 473 VERPEENENSNHWWGMRQTDMEFLAVIAREY-LASPAVSIDAGYYFGNGGKF 523


>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +3

Query: 333 VTRSRANINS*HWWNITTNN*EMRGRIAFQHQITTPCVVSDHKPYKNQGRLF 488
           V R   N NS HWW +   + E    IA ++ + +P V  D   Y   G  F
Sbjct: 473 VERPEENENSNHWWGMRQTDMEFLAVIAREY-LASPAVSIDAGYYFGNGGKF 523


>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +3

Query: 333 VTRSRANINS*HWWNITTNN*EMRGRIAFQHQITTPCVVSDHKPYKNQGRLF 488
           V R   N NS HWW +   + E    IA ++ + +P V  D   Y   G  F
Sbjct: 473 VERPEENENSNHWWGMRQTDMEFLAVIAREY-LASPAVSIDAGYYFGNGGKF 523


>Z54342-11|CAA91146.1|  502|Caenorhabditis elegans Hypothetical
           protein C08H9.5 protein.
          Length = 502

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -1

Query: 479 SLVFVRFMIAYHTRGCNLVLKSNS-SAHFSIVCRDVP 372
           +L+FV F  +Y    CN +L+S+S S +F    R +P
Sbjct: 21  TLIFVVFYSSYGFAHCNTILRSSSLSRNFEDSLRRIP 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,230,208
Number of Sequences: 27780
Number of extensions: 263306
Number of successful extensions: 650
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)