Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_A16
(638 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g04530.1 68417.m00660 Ulp1 protease family protein (snoR29) c... 30 1.1
At3g17650.1 68416.m02254 oligopeptide transporter OPT family pro... 29 2.0
At2g36380.1 68415.m04464 ABC transporter family protein related ... 29 3.4
At4g31170.2 68417.m04425 protein kinase family protein contains ... 28 4.5
At4g31170.1 68417.m04424 protein kinase family protein contains ... 28 4.5
At1g48370.1 68414.m05403 oligopeptide transporter OPT family pro... 28 4.5
At5g02970.1 68418.m00240 hydrolase, alpha/beta fold family prote... 28 6.0
At1g66950.1 68414.m07612 ABC transporter family protein similar ... 28 6.0
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 27 7.9
>At4g04530.1 68417.m00660 Ulp1 protease family protein (snoR29)
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain; snoR29 gene for small
nucleolar RNA GI:15706258
Length = 917
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +3
Query: 144 MADTERGNSQNCFPTSKIASEFSFENITEVFHFDRAPTKGPRIL 275
+AD++ + T+++ EF+++ + EVF + A GP ++
Sbjct: 833 IADSKTAKQMDDLRTNEVPLEFAYDRLPEVFQTEHADDSGPLVV 876
>At3g17650.1 68416.m02254 oligopeptide transporter OPT family
protein similar to iron-phytosiderophore transporter
protein yellow stripe 1 [Zea mays] GI:10770865; contains
Pfam profile PF03169: OPT oligopeptide transporter
protein
Length = 714
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 429 KTYKLL*HRCGLIVHETKKRQYVFVRACVVQSLGKGITTRGGF 301
KT+ + HR GL+ +++ ++ CVV S GI GGF
Sbjct: 108 KTWTKMLHRSGLLKQPFTRQENTVIQTCVVAS--SGIAFSGGF 148
>At2g36380.1 68415.m04464 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1453
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +1
Query: 202 PNFRLKI*LKYSILTARLLKAPEYWLHTGATRAKAASGCDAFSQALYYACAHKHVLSLFR 381
P F LKI L S++ + + A Y+ T A S F Q L Y C ++ LSLFR
Sbjct: 624 PGFLLKIPL--SLIESVIWIALTYY-----TIGFAPSAARFFRQLLAYFCVNQMALSLFR 676
Query: 382 FM 387
F+
Sbjct: 677 FL 678
>At4g31170.2 68417.m04425 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 412
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 375 FSFHGLSNHNDAKEVYTFFEDFTSNTCESHT 467
F H + NHN+ Y F +DF E T
Sbjct: 7 FDLHAVGNHNNDNNYYAFTQDFYQKLGEEGT 37
>At4g31170.1 68417.m04424 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 412
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 375 FSFHGLSNHNDAKEVYTFFEDFTSNTCESHT 467
F H + NHN+ Y F +DF E T
Sbjct: 7 FDLHAVGNHNNDNNYYAFTQDFYQKLGEEGT 37
>At1g48370.1 68414.m05403 oligopeptide transporter OPT family
protein similar to iron-phytosiderophore transporter
protein yellow stripe 1 [Zea mays] GI:10770865; contains
Pfam profile PF03169: OPT oligopeptide transporter
protein
Length = 724
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 429 KTYKLL*HRCGLIVHETKKRQYVFVRACVVQSLGKGITTRGGF 301
KT+ + H+ GL+ +++ ++ CVV S GI GGF
Sbjct: 117 KTWTKMLHKSGLLKQPFTRQENTVIQTCVVAS--SGIAFSGGF 157
>At5g02970.1 68418.m00240 hydrolase, alpha/beta fold family protein
contains Interpro entry IPR000379
Length = 514
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 308 AALALVAPVCNQYSGAFSRRAVKMEYFSYIFKRKF 204
A A+VAPV N Y + + V + ++ KRKF
Sbjct: 279 AGAAMVAPVINPYEPSMVKEEVVKTWEQWLTKRKF 313
>At1g66950.1 68414.m07612 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1454
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 304 AASGCDAFSQALYYACAHKHVLSLFRFM 387
A S F Q L Y C ++ LSLFRF+
Sbjct: 653 APSAARFFRQLLAYFCVNQMALSLFRFL 680
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 90 YVSLRSLGVP*NLPPVCATHP 28
YVSL L VP N PP C P
Sbjct: 46 YVSLPPLSVPGNAPPFCINPP 66
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,090,082
Number of Sequences: 28952
Number of extensions: 266577
Number of successful extensions: 654
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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