Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_A15
         (552 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047658-1|AAC04418.2|  348|Caenorhabditis elegans Hypothetical ...    32   0.32 
AF099927-3|AAZ32795.1|  893|Caenorhabditis elegans Hypothetical ...    28   3.9  
AF099927-1|AAZ32794.1|  955|Caenorhabditis elegans Hypothetical ...    28   3.9  
AC024817-14|AAY86301.1|  354|Caenorhabditis elegans Hypothetical...    28   3.9  
Z98866-15|CAB11554.2|  335|Caenorhabditis elegans Hypothetical p...    27   6.8  
Z98866-13|CAB11552.1|  327|Caenorhabditis elegans Hypothetical p...    27   9.0  
U39745-7|AAA80449.1|  612|Caenorhabditis elegans Uncoordinated p...    27   9.0  
M80241-1|AAA28157.1|  612|Caenorhabditis elegans unc-6 protein.        27   9.0  

>AF047658-1|AAC04418.2|  348|Caenorhabditis elegans Hypothetical
           protein K03H6.2 protein.
          Length = 348

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +2

Query: 269 KLLLEGQPNVGEYAYSLWLQ 328
           KLL  GQP  G+YAYS W Q
Sbjct: 227 KLLTAGQPRTGDYAYSNWHQ 246


>AF099927-3|AAZ32795.1|  893|Caenorhabditis elegans Hypothetical
           protein T04C4.1b protein.
          Length = 893

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 352 TSTMSSPDL*PETVSVFADVWLSFEE*FMYDGADDVTS 239
           TS+M  P + PE V + AD+     +    +G+D+VTS
Sbjct: 760 TSSMCDPAMNPENVLIIADIEQLTVKVLSTEGSDEVTS 797


>AF099927-1|AAZ32794.1|  955|Caenorhabditis elegans Hypothetical
           protein T04C4.1a protein.
          Length = 955

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 352 TSTMSSPDL*PETVSVFADVWLSFEE*FMYDGADDVTS 239
           TS+M  P + PE V + AD+     +    +G+D+VTS
Sbjct: 821 TSSMCDPAMNPENVLIIADIEQLTVKVLSTEGSDEVTS 858


>AC024817-14|AAY86301.1|  354|Caenorhabditis elegans Hypothetical
           protein Y54G2A.45 protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 269 KLLLEGQPNVGEYAYSLWLQ 328
           K+   GQP  G+Y Y+LW Q
Sbjct: 243 KVFTAGQPRTGDYNYALWHQ 262


>Z98866-15|CAB11554.2|  335|Caenorhabditis elegans Hypothetical
           protein Y49E10.18 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 269 KLLLEGQPNVGEYAYSLW 322
           KL+  GQP  G+Y Y++W
Sbjct: 227 KLVTMGQPRTGDYDYAVW 244


>Z98866-13|CAB11552.1|  327|Caenorhabditis elegans Hypothetical
           protein Y49E10.16 protein.
          Length = 327

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 269 KLLLEGQPNVGEYAYSLW 322
           KL+  GQP  G+YA++ W
Sbjct: 221 KLVTLGQPRTGDYAFATW 238


>U39745-7|AAA80449.1|  612|Caenorhabditis elegans Uncoordinated
           protein 6 protein.
          Length = 612

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 388 SLNNSRNSIGK*TSTMSSPDL*PETVSVFADVWLSFE 278
           SL    NSIG  T  +S+P L P+ VS+   +   FE
Sbjct: 104 SLLTDLNSIGNMTCWVSTPSLSPQNVSLTLSLGKKFE 140


>M80241-1|AAA28157.1|  612|Caenorhabditis elegans unc-6 protein.
          Length = 612

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 388 SLNNSRNSIGK*TSTMSSPDL*PETVSVFADVWLSFE 278
           SL    NSIG  T  +S+P L P+ VS+   +   FE
Sbjct: 104 SLLTDLNSIGNMTCWVSTPSLSPQNVSLTLSLGKKFE 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,230,411
Number of Sequences: 27780
Number of extensions: 198941
Number of successful extensions: 472
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)