Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_A12
(274 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1805.16c |||purine nucleoside phosphorylase |Schizosaccharom... 85 1e-18
SPBC25B2.06c |btb2||BTB/POZ domain protein Btb2|Schizosaccharomy... 24 3.4
SPBC216.01c ||SPBC713.13c|DNA damage response protein |Schizosac... 24 3.4
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 24 4.4
SPBC1289.07c |rpc40|rpa42|DNA-directed RNA polymerase I and III ... 24 4.4
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 23 5.9
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 23 5.9
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 23 5.9
SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr 1||... 23 7.8
SPAC22F3.12c |rgs1||regulator of G-protein signaling Rgs1|Schizo... 23 7.8
>SPAC1805.16c |||purine nucleoside phosphorylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 315
Score = 85.4 bits (202), Expect = 1e-18
Identities = 35/65 (53%), Positives = 48/65 (73%)
Frame = +2
Query: 77 VHVVVMRGRFHYYEGYPLWKC*LPVRVMKLLGVHTLIATNADGGLNSNYKIGDLMIVKDH 256
V +++ GR+H YEGYP+ PVR+MK++GV ++ TNA GGLN +K+GDLMI+KDH
Sbjct: 95 VPTMILAGRYHSYEGYPIEATTFPVRLMKVMGVEVMVVTNAAGGLNQGFKVGDLMILKDH 154
Query: 257 INMMG 271
IN G
Sbjct: 155 INFPG 159
>SPBC25B2.06c |btb2||BTB/POZ domain protein Btb2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 284
Score = 24.2 bits (50), Expect = 3.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 72 SIRPKTSPSVVSFYSANWE 16
SIRP+T SV+ F N+E
Sbjct: 138 SIRPETMESVIRFLDPNFE 156
>SPBC216.01c ||SPBC713.13c|DNA damage response protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 836
Score = 24.2 bits (50), Expect = 3.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 152 RVMKLLGVHTLIATNADGGLNSNYKIGD 235
R K +G H + DG N+N ++GD
Sbjct: 694 RSPKTVGTHESNSYEFDGASNNNQRVGD 721
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 23.8 bits (49), Expect = 4.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 11 PTSQLAL*KDTTEGLVFGRIEGVHVVVMRGRFHYYEGYPLWK 136
P Q+ L K T+E L +EG+ + + R E Y WK
Sbjct: 776 PNEQVELRKTTSEHLRIFALEGLRTLCIAKRELTEEEYYEWK 817
>SPBC1289.07c |rpc40|rpa42|DNA-directed RNA polymerase I and III
subunit Rpc40 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 23.8 bits (49), Expect = 4.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 115 RRLPTLEVLTPGSGDETSRSTYTDCYERG 201
R LPT+ +L+P G++ + + C+ +G
Sbjct: 235 RLLPTIHILSPIEGEDAVK--FQKCFPKG 261
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 23.4 bits (48), Expect = 5.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 94 HDDYVYSFYTPEDQSF 47
+ DYVY F+ ED+S+
Sbjct: 286 NSDYVYLFHVHEDKSY 301
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 23.4 bits (48), Expect = 5.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 99 PRMTTTCTPSIRPKTSPSVVSFYSANW 19
P TTT TP+ TS +V++ + W
Sbjct: 945 PTTTTTPTPTTTSATSTNVIAQCGSAW 971
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 23.4 bits (48), Expect = 5.9
Identities = 9/36 (25%), Positives = 16/36 (44%)
Frame = -2
Query: 108 WNRPRMTTTCTPSIRPKTSPSVVSFYSANWEVGYLF 1
W+ + TC P+ T P Y+++ E +F
Sbjct: 702 WSESTIIATCPPATNAGTVPVTFQNYNSSSEAPVMF 737
>SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 224
Score = 23.0 bits (47), Expect = 7.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 31 VEGHHGRTGLRAYRRSTRSRHARSIPLLRRLPTLEVLTP 147
+ GH G L + S SR A+ IP+L T + + P
Sbjct: 136 IMGHSGFLPLASKFPSALSRVAKEIPILLTYMTEDPIVP 174
>SPAC22F3.12c |rgs1||regulator of G-protein signaling
Rgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 23.0 bits (47), Expect = 7.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 164 VSSPEPGVSTSKVGNLRNSGID 99
VSSP P S SKV + GID
Sbjct: 236 VSSPSPKDSLSKVTKYQMFGID 257
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,173,292
Number of Sequences: 5004
Number of extensions: 21794
Number of successful extensions: 70
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 59659786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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