Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_A12
(274 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0998 - 23411422-23411649,23411897-23412625 29 0.51
03_05_0424 + 24107009-24107138,24107381-24107784 29 0.67
02_03_0151 - 15759254-15760459 28 0.89
03_01_0585 - 4331111-4331850,4331960-4332224 27 1.5
05_04_0335 - 20354678-20354686,20354819-20355662,20355739-20356217 27 2.7
08_01_0541 + 4702930-4703328,4703411-4703506,4703601-4703649,470... 26 3.6
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 26 3.6
06_03_0246 + 18672704-18673111,18674069-18674164,18674362-186745... 26 4.7
02_05_0704 - 31064996-31065214,31065306-31065466,31065583-310656... 26 4.7
10_08_0267 - 16333239-16333820,16333904-16334842,16334920-163351... 25 6.3
09_03_0035 - 11765108-11765376,11765909-11766005,11766505-117665... 25 6.3
07_01_0649 - 4882418-4883062 25 6.3
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 25 6.3
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 25 6.3
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 25 6.3
02_05_0969 + 33165396-33165935,33166352-33166883,33166988-331672... 25 6.3
02_05_0602 + 30283893-30284170,30286259-30286305,30286534-302875... 25 6.3
08_02_1100 + 24303920-24304001,24304080-24304576,24304745-243048... 25 8.3
>08_02_0998 - 23411422-23411649,23411897-23412625
Length = 318
Score = 29.1 bits (62), Expect = 0.51
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +1
Query: 25 STVEGHHGRTGLRAYRRSTRSRHARSIPLLRRLPTLEVLTP 147
STVE LR R + R +PLLRRLP L + P
Sbjct: 21 STVEEATDDLVLRDGRVAVRLEEVERVPLLRRLPYLRLAAP 61
>03_05_0424 + 24107009-24107138,24107381-24107784
Length = 177
Score = 28.7 bits (61), Expect = 0.67
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2
Query: 105 NRPRMTTTCTPSIRPKTSP 49
+RP TTT TPS RP +SP
Sbjct: 131 SRPPETTTATPSSRPASSP 149
>02_03_0151 - 15759254-15760459
Length = 401
Score = 28.3 bits (60), Expect = 0.89
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 61 RAYRRSTRSRHARSIPLLRRLPTLEVLTPGSGDETSRSTYTDCYERGRW 207
R +RR+ R H R R LP L G+ RST+ G W
Sbjct: 37 REWRRAAREAHQRHRRRRRHLPCLVAHVHGAAAGVGRSTHVYDPRAGAW 85
>03_01_0585 - 4331111-4331850,4331960-4332224
Length = 334
Score = 27.5 bits (58), Expect = 1.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 31 VEGHHGRTGLRAYRRSTRSRHARSI 105
V GH GR RA + R RH R I
Sbjct: 90 VAGHDGRAAARAASKKKRGRHFRGI 114
>05_04_0335 - 20354678-20354686,20354819-20355662,20355739-20356217
Length = 443
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 85 SRHARSIPLLRRLPTLEVLTPGSGDETSRSTYTDCY 192
S RS+ L R+L V++P SGD+ +S+ D Y
Sbjct: 21 SARLRSLRLGRQLHEHFVVSPYSGDDVVKSSLVDMY 56
>08_01_0541 +
4702930-4703328,4703411-4703506,4703601-4703649,
4703771-4703865
Length = 212
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 102 RPRMTTTCTPSIRPKTSPSVVSFYS 28
+PR T P +PKT PS S S
Sbjct: 14 KPRATARAKPKPKPKTKPSPASLLS 38
>02_01_0471 -
3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 73 RSTRSRHARSIPLLRRLPTLEVLTPGSGDETSR 171
RST S+HAR+ R + LEVL G G +S+
Sbjct: 308 RSTISQHARAQNHFRSIGGLEVLLDGLGLPSSK 340
>06_03_0246 +
18672704-18673111,18674069-18674164,18674362-18674571,
18675780-18675851,18675898-18675945
Length = 277
Score = 25.8 bits (54), Expect = 4.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 166 KFHHPNRESALPKWVTFVIVESTSHDDYVYS 74
KFHHPN S KW + S +YS
Sbjct: 189 KFHHPNSGSGHEKWDGSLQTNQISSGVNIYS 219
>02_05_0704 -
31064996-31065214,31065306-31065466,31065583-31065660,
31066560-31066651,31066775-31066833,31066924-31067010,
31067118-31067214,31067311-31067495,31067593-31067665,
31067725-31067805,31067948-31068048,31068133-31068246,
31068391-31068488,31069789-31069915
Length = 523
Score = 25.8 bits (54), Expect = 4.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 37 GHHGRTGLRAYRRSTRSRHARSIP 108
GHH R+YR TRS S+P
Sbjct: 490 GHHWWDKFRSYRTDTRSEEFYSLP 513
>10_08_0267 -
16333239-16333820,16333904-16334842,16334920-16335172,
16336837-16337063,16338189-16339388
Length = 1066
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 34 EGHHGRTGLRAYRRSTRSRHARSIPLLR 117
E +GR R RR HARSIP +R
Sbjct: 410 EKEYGRRCQRRRRRRRLPEHARSIPQVR 437
>09_03_0035 -
11765108-11765376,11765909-11766005,11766505-11766579,
11767367-11767650,11768466-11768562
Length = 273
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 169 RSTYTDCYERGRWIEFQL*DWRLDDC*GPY 258
R+ Y +C+ R +F W DDC G +
Sbjct: 90 RAAYHECFNRWYAEKFAKGQWHKDDCVGEW 119
>07_01_0649 - 4882418-4883062
Length = 214
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 58 LRAYRRSTRSRHARSIPLLRRLP-TLEVLTP 147
L A RR+ R ++ + LLR+LP ++ LTP
Sbjct: 180 LEASRRARRMKYKKKARLLRKLPLEVDPLTP 210
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 106 PLLRRLPTLEVLTPGSGDETSRSTYTD 186
P LR LP L + P SG+ SRS+ +D
Sbjct: 305 PELRPLPPLPRVGPPSGEFASRSSASD 331
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 133 EVLTPGSGDETSRSTYTDC-YERGRWIE 213
E+L PGS D T+R + Y +G W E
Sbjct: 23 EILPPGSVDHTTRLVLGNALYFKGAWTE 50
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 133 EVLTPGSGDETSRSTYTDC-YERGRWIE 213
E+L PGS D T+R + Y +G W E
Sbjct: 231 EILPPGSVDHTTRLVLGNALYFKGAWTE 258
>02_05_0969 + 33165396-33165935,33166352-33166883,33166988-33167242,
33167515-33167606,33167745-33167942,33168049-33168240,
33168341-33168562,33168858-33169024,33169117-33169210,
33169308-33169364,33169459-33169587,33169681-33169752,
33170180-33170293,33170419-33170580,33170666-33170794,
33171057-33171158,33171266-33171342,33171470-33171592,
33171666-33172227
Length = 1272
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 1 EEIPNFPVSTVEGHHGRTGLRAYRRSTRSRHA 96
E+ N P S RTG +A RSTR R A
Sbjct: 1062 EDDSNGPFSAQHTVASRTGTKASTRSTRKRQA 1093
>02_05_0602 +
30283893-30284170,30286259-30286305,30286534-30287510,
30287611-30287920,30288561-30290197
Length = 1082
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 49 RTGLRAYRRSTRSRHARSIPLLRRLP 126
R+ RA R + RHA ++ LL RLP
Sbjct: 759 RSIFRAGRAAITERHAAAVTLLSRLP 784
>08_02_1100 +
24303920-24304001,24304080-24304576,24304745-24304842,
24304982-24305813,24306463-24306645,24306726-24307346
Length = 770
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 176 HTLIATNADGGLNSNYKIGDLMIVK 250
H LI A+ G NS Y +G + IVK
Sbjct: 149 HVLITIFANTGSNSVYAVGIITIVK 173
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,671,194
Number of Sequences: 37544
Number of extensions: 144015
Number of successful extensions: 435
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 256259052
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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