Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_A12
(274 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g05810.1 68418.m00639 zinc finger (C3HC4-type RING finger) fa... 29 0.33
At1g02800.1 68414.m00237 endo-1,4-beta-glucanase / cellulase (CE... 27 1.8
At5g17850.1 68418.m02092 cation exchanger, putative (CAX8) simil... 26 3.1
At2g23250.1 68415.m02777 UDP-glucoronosyl/UDP-glucosyl transfera... 26 3.1
At5g63970.1 68418.m08032 copine-related low similarity to SP|Q99... 25 5.4
At5g57930.2 68418.m07247 expressed protein 25 5.4
At5g57930.1 68418.m07246 expressed protein 25 5.4
At3g51770.1 68416.m05677 tetratricopeptide repeat (TPR)-containi... 25 5.4
At1g72760.1 68414.m08413 protein kinase family protein contains ... 25 5.4
At5g42360.1 68418.m05158 kelch repeat-containing F-box family pr... 25 9.5
At5g42350.1 68418.m05157 kelch repeat-containing F-box family pr... 25 9.5
At5g17050.1 68418.m01998 UDP-glucoronosyl/UDP-glucosyl transfera... 25 9.5
At5g17040.1 68418.m01997 UDP-glucoronosyl/UDP-glucosyl transfera... 25 9.5
At5g17030.1 68418.m01996 UDP-glucoronosyl/UDP-glucosyl transfera... 25 9.5
At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family... 25 9.5
At2g27680.1 68415.m03354 aldo/keto reductase family protein cont... 25 9.5
At2g25000.1 68415.m02989 WRKY family transcription factor contai... 25 9.5
At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger) fa... 25 9.5
At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger) fa... 25 9.5
>At5g05810.1 68418.m00639 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 353
Score = 29.5 bits (63), Expect = 0.33
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +1
Query: 19 PVSTVEGHHGRTGLRAYRRS---TRSRHARSIPLLRRLPTLEVLTPGSGDETSRSTYTDC 189
PVS + G H G RA R + T S + + RR + +G+E S S +C
Sbjct: 176 PVSRISGRHSSAGERASRLNEIRTSSSYKSNPMSFRRSLDSSLKVNDAGEEKSESVAVNC 235
Query: 190 YER 198
+R
Sbjct: 236 LDR 238
>At1g02800.1 68414.m00237 endo-1,4-beta-glucanase / cellulase (CEL2)
identical to endo-1,4-beta glucanase; ATCEL2 GI:3132891
from [Arabidopsis thaliana]
Length = 501
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 154 PNRESALPKWVTFVIVESTSHDDYVY 77
PN + A+ +W T ++++TSH D +Y
Sbjct: 127 PNAKDAI-RWATDFLLKATSHPDTIY 151
>At5g17850.1 68418.m02092 cation exchanger, putative (CAX8) similar
to sodium/calcium exchanger protein [Mus musculus]
gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 559
Score = 26.2 bits (55), Expect = 3.1
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 2 KRYPTSQLAL*KDTTEGLVFGRIEGVHVVVM----RGRFHYYEGYPLWKC*LPVRVMKLL 169
KR S+ L +D E + G + G H +V R++Y++ +W LP+ + ++L
Sbjct: 262 KRGSLSEPILQRDGLEEIEDGVVNGEHQIVDDDDDHQRYYYWKRLVIWAITLPLNLPRIL 321
Query: 170 GV 175
+
Sbjct: 322 TI 323
>At2g23250.1 68415.m02777 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains similarity to
glucosyltransferases
Length = 438
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 100 SIPLL--RRLPTLEVLTPGSGDETSRSTYTDCYERGRWI 210
++PLL R LP+L + + G+ T + + DC + +W+
Sbjct: 152 ALPLLEVRDLPSLMLPSQGANVNTLMAEFADCLKDVKWV 190
>At5g63970.1 68418.m08032 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 367
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 100 TSHDDYVYSFYTPEDQSFRGV 38
T+ D YV+SFY PE++S G+
Sbjct: 100 TTRDQYVFSFY-PENKSCDGL 119
>At5g57930.2 68418.m07247 expressed protein
Length = 443
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 103 IPLLRRLPTLEVLTPGSGDET 165
+PLL LP E+ P S +ET
Sbjct: 286 VPLLTELPVSEITPPSSEEET 306
>At5g57930.1 68418.m07246 expressed protein
Length = 440
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 103 IPLLRRLPTLEVLTPGSGDET 165
+PLL LP E+ P S +ET
Sbjct: 283 VPLLTELPVSEITPPSSEEET 303
>At3g51770.1 68416.m05677 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 958
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 61 RAYRRSTRSRHARSIPLLRRLPTLEVLTPGSGDETSRSTYTDCYER 198
+ +RRS RS ++ + ++ L+ GDE +T DC R
Sbjct: 158 KLFRRSLRSSRQHAVDVHAKVVLASWLSSRGGDELIGTTSMDCCGR 203
>At1g72760.1 68414.m08413 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 697
Score = 25.4 bits (53), Expect = 5.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1
Query: 262 INMVLNNHQVANLIVG 215
+N + NN+ +ANL+VG
Sbjct: 100 VNYITNNYYIANLVVG 115
>At5g42360.1 68418.m05158 kelch repeat-containing F-box family
protein contains Pfam profiles PF01344: Kelch motif,
PF00646: F-box domain
Length = 563
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +1
Query: 58 LRAYRRSTRSRHARSIPLL 114
++A+R+ RHARS+P++
Sbjct: 259 IKAWRKIASMRHARSLPIV 277
>At5g42350.1 68418.m05157 kelch repeat-containing F-box family
protein contains Pfam profiles PF01344: Kelch motif,
PF00646: F-box domain
Length = 563
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +1
Query: 58 LRAYRRSTRSRHARSIPLL 114
++A+R+ RHARS+P++
Sbjct: 259 IKAWRKIASMRHARSLPIV 277
>At5g17050.1 68418.m01998 UDP-glucoronosyl/UDP-glucosyl transferase
family protein similar to UDP glucose:flavonoid
3-o-glucosyltransferase, Vitis vinifera, EMBL:AF000372
Length = 460
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 35 KDTTEGLVFGRIEGV 79
KDT EG+VFG ++ V
Sbjct: 189 KDTPEGVVFGNLDSV 203
>At5g17040.1 68418.m01997 UDP-glucoronosyl/UDP-glucosyl transferase
family protein similar to UDP glucose:flavonoid
3-o-glucosyltransferase GI:13620861 from [Vitis
vinifera]; contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 442
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 35 KDTTEGLVFGRIEGV 79
KDT EG+VFG ++ V
Sbjct: 170 KDTPEGVVFGNLDSV 184
>At5g17030.1 68418.m01996 UDP-glucoronosyl/UDP-glucosyl transferase
family protein similar to UDP glucose:flavonoid
3-o-glucosyltransferase from Vitis vinifera,
EMBL:AF000372
Length = 459
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 35 KDTTEGLVFGRIEGV 79
KDT EG+VFG ++ V
Sbjct: 186 KDTQEGVVFGNLDSV 200
>At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to vegetative cell wall
protein gp1 [Chlamydomonas reinhardtii]
gi|12018147|gb|AAG45420
Length = 175
Score = 24.6 bits (51), Expect = 9.5
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = -2
Query: 267 IILIWSLTIIKSPIL*LEFNPPSAFVAISVCTPRSFITRTGSQHFQSG*PS**WNRPRMT 88
+ ++ SL ++ IL PS +A S S ++ GS + + P + P
Sbjct: 8 VAMMLSLVLVSGEILTKSSPAPSPDLADSPLIHASPPSKLGSHNSPAESPIEYSSPPEPE 67
Query: 87 TTCTPSIRPKTSPSV 43
T +PS P SPSV
Sbjct: 68 TEHSPSPSPANSPSV 82
>At2g27680.1 68415.m03354 aldo/keto reductase family protein
contains Pfam profile PF00248: oxidoreductase, aldo/keto
reductase family
Length = 384
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 167 LGVHTLIATNADGGLNSNYK 226
+ VH++IATN L+SNY+
Sbjct: 3 VSVHSVIATNLATTLSSNYR 22
>At2g25000.1 68415.m02989 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 271
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 4 EIPNFPVSTVEGHHGRTGLRA 66
E P+F V+T EG H TG A
Sbjct: 188 EDPSFLVATYEGTHNHTGPHA 208
>At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 160 HHPNRESALPKWVTFVIVESTS 95
H+P+R S L W F +ES S
Sbjct: 466 HNPSRTSELSPWSLFPSIESPS 487
>At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 160 HHPNRESALPKWVTFVIVESTS 95
H+P+R S L W F +ES S
Sbjct: 466 HNPSRTSELSPWSLFPSIESPS 487
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,152,878
Number of Sequences: 28952
Number of extensions: 114080
Number of successful extensions: 355
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 12,070,560
effective HSP length: 68
effective length of database: 10,101,824
effective search space used: 222240128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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