Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_A11
(303 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 33 0.044
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 33 0.059
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 32 0.078
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.18
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 31 0.24
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.31
SB_26103| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.72
SB_9409| Best HMM Match : HLH (HMM E-Value=5.8e-17) 29 0.95
SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.7
SB_21961| Best HMM Match : FlaE (HMM E-Value=1.2) 28 1.7
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 27 2.2
SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07) 27 2.9
SB_16224| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.9
SB_28164| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.1
SB_43038| Best HMM Match : AAA (HMM E-Value=0.84) 26 5.1
SB_37609| Best HMM Match : Extensin_2 (HMM E-Value=0.081) 26 5.1
SB_52209| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 33.1 bits (72), Expect = 0.044
Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 3 TSAKIPSADTALEVKPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEIT-PAE 179
TSA +A T V P TVSQE AP T V P E A P ++ D E T P E
Sbjct: 364 TSAPESTAATESTVAPETTVSQETTVAPETTV-PTETTAAPETTVAPDITFAPETTVPPE 422
Query: 180 VKEKTD 197
D
Sbjct: 423 TTGAPD 428
Score = 33.1 bits (72), Expect = 0.044
Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 3 TSAKIPSADTALEVKPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEIT-PAE 179
TSA +A T V P TVSQE AP T V P E A P ++ D E T P E
Sbjct: 1433 TSAPESTAATESTVAPETTVSQETTVAPETTV-PTETTAAPETTVAPDITFAPETTVPPE 1491
Query: 180 VKEKTD 197
D
Sbjct: 1492 TTGAPD 1497
Score = 32.3 bits (70), Expect = 0.078
Identities = 23/58 (39%), Positives = 27/58 (46%)
Frame = +3
Query: 3 TSAKIPSADTALEVKPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEITPA 176
TSA +A T V P TVSQE AP T V P E P +++ S E T A
Sbjct: 2027 TSAPESTAATESTVAPETTVSQETTVAPETTV-PTETTVVPETTPALETTSAPESTAA 2083
Score = 31.9 bits (69), Expect = 0.10
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 3 TSAKIPSADTALEVKPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEIT-PAE 179
TSA +A T V P TVSQE AP T V P E A P ++ + E T P E
Sbjct: 2327 TSAPESTAATESTVAPETTVSQETTVAPETTV-PTETTAAPETTVAPEITFAPETTLPPE 2385
Query: 180 VKEKTD 197
D
Sbjct: 2386 TTAAPD 2391
Score = 31.1 bits (67), Expect = 0.18
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 3 TSAKIPSADTALEVKPVLTVSQEKAEAPATEVTPQEPVA 119
TSA +A T V P TVSQE AP T P+ VA
Sbjct: 1783 TSAPESTAATESTVAPETTVSQETTLAPETTAAPETTVA 1821
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 32.7 bits (71), Expect = 0.059
Identities = 24/58 (41%), Positives = 26/58 (44%)
Frame = +3
Query: 3 TSAKIPSADTALEVKPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEITPA 176
TSA +A T V P TVSQE AP T V P E A P L + E T A
Sbjct: 1725 TSAPESTAATESTVAPETTVSQETTVAPETTV-PTETTAAPETTLEPEITVAPETTVA 1781
Score = 31.9 bits (69), Expect = 0.10
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 3 TSAKIPSADTALEVKPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEIT-PAE 179
TSA +A T V P TVSQE AP T V P E A P ++ + E T P E
Sbjct: 2685 TSAPESTAATESTVAPETTVSQETTVAPETTV-PTETTAAPETTVAPEITFAPETTVPPE 2743
Query: 180 VKEKTD 197
D
Sbjct: 2744 TTAAPD 2749
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 32.3 bits (70), Expect = 0.078
Identities = 23/58 (39%), Positives = 27/58 (46%)
Frame = +3
Query: 3 TSAKIPSADTALEVKPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEITPA 176
TSA +A T V P TVSQE AP T V P E P +++ S E T A
Sbjct: 331 TSAPESTAATESTVAPETTVSQETTVAPETTV-PTETTVVPETTPALETTSAPESTAA 387
Score = 31.1 bits (67), Expect = 0.18
Identities = 22/56 (39%), Positives = 26/56 (46%)
Frame = +3
Query: 3 TSAKIPSADTALEVKPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEIT 170
TSA +A T V P TVSQE AP T V P E A P ++ + E T
Sbjct: 265 TSAPESTAATESTVAPETTVSQETTVAPETTV-PTETTAAPETTVAPEITFAPETT 319
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 31.1 bits (67), Expect = 0.18
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 3 TSAKIPSADTALEVKPVLTVSQEKAEAPATEVTPQEPVA 119
T+ S D+ + PV TV++E AP T V+P+ VA
Sbjct: 806 TTVASESTDSESTIVPVTTVARESTFAPGTSVSPEITVA 844
Score = 27.9 bits (59), Expect = 1.7
Identities = 23/89 (25%), Positives = 30/89 (33%), Gaps = 2/89 (2%)
Frame = +3
Query: 42 VKPVLTVSQEKAEAPATEVTPQEPVADPVKVLS--VDAKSQTEITPAEVKEKTDXXXXXX 215
V P T+S E AP T VT + V V S DA T + + T
Sbjct: 509 VVPGTTISPESTVAPGTTVTSESTVTRGATVASAITDAPGTTVLPESTASPGTTVASEIT 568
Query: 216 XXXXXXXXXXSAITESQAKPPLLEAKEKS 302
S +ES P A+E +
Sbjct: 569 VTQGNTVASESTDSESTIVPVTTVAREST 597
Score = 27.5 bits (58), Expect = 2.2
Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Frame = +3
Query: 51 VLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEITPAE--VKEKTDXXXXXXXXX 224
V TVS E P T V+P+ VA + V S++ ITP + E T
Sbjct: 1043 VTTVSSESTLTPGTTVSPESTVAPGIAV-----ASESSITPGTTVLPESTAAPLTTGASE 1097
Query: 225 XXXXXXXSAITESQAKPPLLEAKEKS 302
+ + ES P + E +
Sbjct: 1098 STVAPGTTVLPESTVTPGTTVSSEST 1123
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 42 VKPVLTVSQEKAEAPATEVTPQEPVADPVKVLS 140
V+P+ T + E AP T ++P+ VA V S
Sbjct: 402 VEPLTTAASESTVAPGTTLSPESTVAPGTTVAS 434
Score = 27.1 bits (57), Expect = 2.9
Identities = 21/82 (25%), Positives = 28/82 (34%)
Frame = +3
Query: 51 VLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEITPAEVKEKTDXXXXXXXXXXX 230
V TVS E P T V P+ + + V S +S E TD
Sbjct: 721 VTTVSSESTLTPGTTVLPKSTASPGITVAS---ESTVTRGTTVASEGTDALVTTVSPEST 777
Query: 231 XXXXXSAITESQAKPPLLEAKE 296
+ + ES A P + A E
Sbjct: 778 LTPGTTVLPESTASPGITVASE 799
Score = 26.6 bits (56), Expect = 3.9
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 3 TSAKIPSADTALEVKPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEITP 173
T A P+ + V TV+ +AP T V+P+ VA + A S++ ITP
Sbjct: 842 TVAPGPTIGSESTVTRGATVASASTDAPGTTVSPESTVAP-----GIAAASESSITP 893
Score = 25.4 bits (53), Expect = 8.9
Identities = 19/85 (22%), Positives = 30/85 (35%)
Frame = +3
Query: 48 PVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEITPAEVKEKTDXXXXXXXXXX 227
P T++ + AP T V+P+ V P ++ + + E T E E T
Sbjct: 1150 PRTTLAHKSTVAPGTTVSPESTV-QPESTIATVSSAAPETT--ESSESTAELLTAAASES 1206
Query: 228 XXXXXXSAITESQAKPPLLEAKEKS 302
+ ES P A E +
Sbjct: 1207 TVASGTTLAPESTVAPETTVASEST 1231
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 30.7 bits (66), Expect = 0.24
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3
Query: 133 TLTGSATGSCGVTSVAGASAFSWLTVNTGFTSSAVSALGI 14
T GS+ + G+TS AG + S +T T FTS S GI
Sbjct: 3043 TSAGSSPPTSGITSSAGVNISSTITPTTTFTSIIKSESGI 3082
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 30.3 bits (65), Expect = 0.31
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Frame = +3
Query: 18 PSADTALE--VKPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEITPAEVKEK 191
P A E V P T + E AP T VTPQ VA P ++ + + E T V E
Sbjct: 2991 PETTVAYETTVAPDSTAAPETTVAPGTTVTPQSTVA-PETTIAPETTDEPETT--VVPET 3047
Query: 192 TDXXXXXXXXXXXXXXXXSAITESQAKP 275
T +A+ ES P
Sbjct: 3048 TAVPETTVSQETTVAPETTALPESTVAP 3075
Score = 29.9 bits (64), Expect = 0.41
Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 2/96 (2%)
Frame = +3
Query: 15 IPSADTALEVKPVLTVSQEKAEAPATEVTPQEPVADPVKVL--SVDAKSQTEITPAEVKE 188
+P V P TV+ AP T VTP+ VA VL + DA +T + P E
Sbjct: 3086 VPETTVMTTVAPDSTVAPVTTFAPGTTVTPESTVAPETTVLPETTDA-PETTVPP----E 3140
Query: 189 KTDXXXXXXXXXXXXXXXXSAITESQAKPPLLEAKE 296
TD + E+ P +A E
Sbjct: 3141 TTDAPETTVASETTAEPDTTQAPETTVTPETTKAPE 3176
Score = 28.7 bits (61), Expect = 0.95
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 42 VKPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEIT 170
V P T + E APAT VTP+ VA P ++ + + E T
Sbjct: 3287 VAPDSTAAPETTVAPATTVTPESTVA-PETTIAPETTDEPETT 3328
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3
Query: 48 PVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEITPAE 179
P TVS E EAP T V P+ +A V + P E
Sbjct: 5154 PETTVSPETTEAPGTTVAPETTMAPETTVAPETTMAPETTVPQE 5197
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 42 VKPVLTVSQEKAEAPATEVTPQEPVADPVKVL--SVDAKSQTEITPAEVKEKT 194
V+P T++ E + AP T V P+ V V + DA T + V +T
Sbjct: 2935 VEPGTTLTSETSVAPGTTVAPKSTVGPETSVAPETTDAPETTVVPETTVAPET 2987
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 48 PVLTVSQEKAEAPATEVTPQEPVA 119
P TVS E EAP T V P+ +A
Sbjct: 3969 PETTVSPETTEAPGTTVAPETTMA 3992
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 48 PVLTVSQEKAEAPATEVTPQEPVA 119
P TVS E EAP T V P+ +A
Sbjct: 4449 PETTVSPETTEAPGTTVAPETTMA 4472
>SB_26103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1176
Score = 29.1 bits (62), Expect = 0.72
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 48 PVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEITPAEVKEKTD 197
P LT +E+ E P E ++ A ++L V SQ + PAEVK+K +
Sbjct: 813 PALTKLEEEFENPKAEPDLEKLAALQERILKV--LSQVKAIPAEVKDKIE 860
>SB_9409| Best HMM Match : HLH (HMM E-Value=5.8e-17)
Length = 362
Score = 28.7 bits (61), Expect = 0.95
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 45 KPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEIT 170
KP + ++ E PAT T +EP ++ ++V AK + T
Sbjct: 217 KPTIKTKRKLNERPATTATKEEPPVKKLRPVAVRAKPVNQTT 258
>SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1276
Score = 27.9 bits (59), Expect = 1.7
Identities = 22/83 (26%), Positives = 34/83 (40%)
Frame = +3
Query: 18 PSADTALEVKPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEITPAEVKEKTD 197
PS DTA V+ + T + EA +VTPQ+ + DA +QT+ A + + D
Sbjct: 86 PSGDTATAVE-LATNTPVVGEA---DVTPQKTQTTAALTQTQDATTQTQQDAAALTQTQD 141
Query: 198 XXXXXXXXXXXXXXXXSAITESQ 266
A T++Q
Sbjct: 142 ATTQTQQDAAALTQTQDATTQTQ 164
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/77 (20%), Positives = 32/77 (41%)
Frame = +3
Query: 63 SQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEITPAEVKEKTDXXXXXXXXXXXXXXX 242
++ AEA A +T ++ +A+P S ++ S + P+ E +
Sbjct: 544 AEHLAEATAAPITKKDEIAEPAVPDSAESGSGQQ--PSSASEDFESGSGANLAEDLATGT 601
Query: 243 XSAITESQAKPPLLEAK 293
S + E+ P + +AK
Sbjct: 602 VSKVKETPQVPEIPKAK 618
>SB_21961| Best HMM Match : FlaE (HMM E-Value=1.2)
Length = 816
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 27 DTALEVKPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEITPAEVKEK 191
+ A + KPV T ++ PA VT +EPV K + + + ++TP + K
Sbjct: 643 ECAFKGKPVET-AEVIQPTPAVTVTSKEPVVATCKAVKKEMSIREKMTPKATRRK 696
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 30 TALEVKPVLTVSQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEI 167
TA + ++T + E P + P +P+ DPV + A T+I
Sbjct: 2949 TARYFESLVTQDADTQENPEMQPDPSDPIGDPVGIPVSGAHKSTDI 2994
>SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07)
Length = 585
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 42 VKPVLTVSQEKAEAPATEVTPQEPVADPVKVLS 140
V+P+ T + E AP T ++P+ VA V S
Sbjct: 374 VEPLTTAASESTVAPGTTLSPESTVAPGTTVAS 406
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 51 VLTVSQEKAEAPATEVTPQEPVADPVKVLS 140
V TVS E P T V P+ VA + V S
Sbjct: 193 VTTVSPESTLTPGTTVLPESTVAPGIAVAS 222
>SB_16224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1127
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 63 SQEKAEAPATEVTPQEPVADPVKVLSVDAKSQTEITPAEVKEKT 194
++++ EAP +E P + + P+ +Q EIT + +K +T
Sbjct: 548 TRKQKEAPGSEAEPSQKESTPMPSDDTIESNQHEITKSPLKHET 591
>SB_28164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +3
Query: 48 PVLTVSQEKAEAPATE----VTPQEPVADPVKVLSVDAKSQTEITPAEVKEKTD 197
P LT+S K E + +TP +P +P K+ S SQT ++++TD
Sbjct: 123 PKLTISPPKRENKISSEKDVITPGQPRKNPEKISSSVLDSQTRERFVGMRKQTD 176
>SB_43038| Best HMM Match : AAA (HMM E-Value=0.84)
Length = 957
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3
Query: 139 LRTLTGSATGSCGVTSVAGASAFSWLTVNTGFTSSAVSALGI 14
LRTL GS + CG A A VN T V+A G+
Sbjct: 730 LRTLCGSLSLRCGRLMALAAGALHIAPVNQRATDPHVAAEGV 771
>SB_37609| Best HMM Match : Extensin_2 (HMM E-Value=0.081)
Length = 1617
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 21 SADTALEVKPVLTVSQEKAEAPATEVTPQEPVADPV 128
S D+ ++ L SQ + P T TPQ+P DPV
Sbjct: 1105 SFDSLVQHHSPLPESQLRHSWPKTSETPQKPENDPV 1140
>SB_52209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 30 TALEVKPVLTVSQEKAEAPATEVTPQEPVADPV 128
TAL K + Q K +APA++ P + A PV
Sbjct: 9 TALTAKLQVLEEQLKEQAPASQTPPHQGRAPPV 41
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 27 DTALEVKPVLTVSQEKAEAPATEVTPQEPVAD--PVKVLSVDAKSQTEITPAEVKEKTD 197
D+A P+ S P T PQ+P D V S + +S +E++ + ++KTD
Sbjct: 493 DSASTSTPMQLPSSSSTVTPTTTTPPQQPRPDSGDAAVGSSETES-SEVSSGKPEQKTD 550
>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 18 PSADTALEVKPVLTVSQEKAEAPATEVTPQEPVADP 125
P + P + K +P+ ++TP +PVA P
Sbjct: 453 PKLQPTFQPAPAHIETAPKVRSPSPDLTPVQPVAGP 488
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,040,343
Number of Sequences: 59808
Number of extensions: 88913
Number of successful extensions: 459
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 364677581
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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