Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_A10
         (283 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL109839-6|CAI95635.1|  134|Homo sapiens chromosome 20 open read...    28   6.3  
AL353588-3|CAI40747.1|  985|Homo sapiens alanyl-tRNA synthetase ...    27   8.4  

>AL109839-6|CAI95635.1|  134|Homo sapiens chromosome 20 open reading
           frame 119 protein.
          Length = 134

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 24  LSKNVEVCNNLGAFSCCSCWSI 89
           L+++   C  L   SCCSCWS+
Sbjct: 87  LARSRACCWRLTTQSCCSCWSL 108


>AL353588-3|CAI40747.1|  985|Homo sapiens alanyl-tRNA synthetase 2,
           mitochondrial (putative) protein.
          Length = 985

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -1

Query: 229 DWVPTVAVCIGLRIYPWLTGKPVTTSTMFRDVRRYA 122
           D + T++VCI   I+P ++G P+    + R   R++
Sbjct: 326 DHIRTLSVCISDGIFPGMSGPPLVLRRILRRAVRFS 361


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,680,425
Number of Sequences: 237096
Number of extensions: 908009
Number of successful extensions: 1536
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1536
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1386033866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)