Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_A10
         (283 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   2.9  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   2.9  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   2.9  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   2.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   3.8  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    20   5.0  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    20   5.0  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    20   6.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   6.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   6.7  
M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee homeobox-...    19   8.8  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 206 HCDGWDPIVPVYF 244
           H D  DP++PV+F
Sbjct: 152 HGDFKDPLIPVHF 164


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 206 HCDGWDPIVPVYF 244
           H D  DP++PV+F
Sbjct: 152 HGDFKDPLIPVHF 164


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 206 HCDGWDPIVPVYF 244
           H D  DP++PV+F
Sbjct: 203 HGDFKDPLIPVHF 215



 Score = 19.4 bits (38), Expect = 8.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 257 SWSNRNKPGRLGPNRRSVHWTSH 189
           S ++ N P     N+ + H+TSH
Sbjct: 104 SSTSSNDPKNQYKNQNNNHYTSH 126


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 206 HCDGWDPIVPVYF 244
           H D  DP++PV+F
Sbjct: 152 HGDFKDPLIPVHF 164


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 109 GRLHRHIS*HHG 144
           G+LHRH+  H G
Sbjct: 161 GKLHRHMRIHTG 172


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 132 GDMPMETALPRYVMRYSSMS 73
           G  P+E  +  YV+  SS+S
Sbjct: 32  GGPPVEVGVTMYVLSISSLS 51


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -2

Query: 210 QCALDFAFTLG*LVNQSQPVPC 145
           +C+L+    L  L+ +++P+ C
Sbjct: 153 ECSLNLETYLDKLIEKNEPIEC 174


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 132 GDMPMETALPRYVMRYSSMS 73
           G  P+E  +  YV+  SS+S
Sbjct: 32  GGPPVEVGVTMYVLSISSVS 51


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 230 RLGPNRRSVHW 198
           RL PN +S+H+
Sbjct: 514 RLNPNEKSLHY 524


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 230 RLGPNRRSVHW 198
           RL PN +S+H+
Sbjct: 514 RLNPNEKSLHY 524


>M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H17. ).
          Length = 79

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 202 CTLRRLGPNR 231
           CTLR+  PNR
Sbjct: 1   CTLRKHKPNR 10


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,477
Number of Sequences: 438
Number of extensions: 1603
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5494764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)